Pairwise Alignments

Query, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 473 a.a., chromosomal replication initiator protein DnaA from Dechlorosoma suillum PS

 Score =  456 bits (1172), Expect = e-132
 Identities = 234/472 (49%), Positives = 322/472 (68%), Gaps = 24/472 (5%)

Query: 6   WQQCIGRLQDELSAQQFSMWIRPLQAEMD---GDTLVLYAPNRFVLDWVRDKYINIINQF 62
           W  C+ + + EL  QQF+ WI+PL+ E +    + L L APN F+L WV+++Y++ I + 
Sbjct: 5   WSICLSQFEQELPPQQFNTWIKPLRLEGEDNLAEGLRLLAPNGFILKWVKERYLSRIEEL 64

Query: 63  FTEQMGNDAP-KLRFDIG--------SRPSAKKPEPAPVAAVRVPSPQTKASVGTAFNTT 113
                   AP  +   IG        +RP+A    PA + A    +P+T A    A    
Sbjct: 65  AHSHFS--APVAISLGIGGGRTAVAVARPTAPAAAPAEIPAA---APRTMAPAPAAAPAP 119

Query: 114 EPVANTNH-------RSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGG 166
            P A  N+       ++ + P + FDN V GK+N L +AAA+QVA+NPG +YNPLF+YGG
Sbjct: 120 APAARRNNGPQSSYEKTRLIPGFTFDNLVVGKANDLARAAAMQVAQNPGVSYNPLFIYGG 179

Query: 167 TGLGKTHLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALF 226
            GLGKTH++HA+GN I++ +P+  V Y+H+E +  D+V+A Q  + + FKRYY+S+D L 
Sbjct: 180 VGLGKTHVIHAIGNAILQADPDKVVRYVHAEDYYSDVVRAYQQKSFDVFKRYYKSLDVLL 239

Query: 227 IDDIQFFANKDRSQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVA 286
           +DD+QFF  K+R+QEEFF  FNAL E   QII+T D YPK+I+G++DRL +RF WGLTV 
Sbjct: 240 VDDVQFFNGKNRTQEEFFFVFNALTEAKKQIIITCDTYPKDINGLDDRLVTRFDWGLTVQ 299

Query: 287 IEPPELETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRP 346
           IEPPE E RVAIL +KA+  G+ L DEVAFFIAK LRSNVRELEGAL +V+A + F GR 
Sbjct: 300 IEPPETEMRVAILKKKAEAEGVALDDEVAFFIAKHLRSNVRELEGALKKVLAYSLFHGRE 359

Query: 347 ITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMAL 406
           I +D  ++AL+D++    + +T++NIQKTVAEYYKIK+AD+ SK+R+R++ARPRQVAM L
Sbjct: 360 IALDLAKDALKDVIGAFNRQITVENIQKTVAEYYKIKVADLYSKKRTRAIARPRQVAMWL 419

Query: 407 SKELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTL 458
           +K+LT  S P IGDAFGGRDHTTVLHA R I  LR + +++  D   L++ L
Sbjct: 420 AKDLTPHSYPMIGDAFGGRDHTTVLHAVRTIDTLRAKDNELNHDLHVLLQVL 471