Pairwise Alignments

Query, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 444 a.a., chromosomal replication initiator protein DnaA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  148 bits (374), Expect = 3e-40
 Identities = 119/449 (26%), Positives = 199/449 (44%), Gaps = 42/449 (9%)

Query: 13  LQDELSAQQFSMWIRPLQAEMDGDT--LVLYAPNRFVLDWVRDKYINIINQFFTEQMGND 70
           LQ     Q    W  PL   +  +   L +  P+ F   W              E +G D
Sbjct: 10  LQQTCQEQDLRQWYDPLAITLSTNDKRLEVQFPHSFFAQWFSATAQVTFESRLREFLG-D 68

Query: 71  APKLRFDIGSRPSAKKPEPAPVAAVRVPSPQTKASVGTAFNTTEPVANTNHRSNINPTYQ 130
              LR+  G+  S       P AA   P+P+T   +   F                  + 
Sbjct: 69  GYVLRYSSGNGGS-------PQAA---PAPKTARQLDYPFGAR---------------FT 103

Query: 131 FDNFVEGKSNQLGKAAALQVAENPGG----AYNPLFLYGGTGLGKTHLLHAVGNGIIKNN 186
           FD F+  + NQ   A+A +VA +        YNP  + GG G GKTHLL A+ N + ++ 
Sbjct: 104 FDTFLSNRKNQFPVASAKEVARDGRDPHDRVYNPFVVCGGNGNGKTHLLRAIANELSRSR 163

Query: 187 PNAKV----VYMHSERFVQDMVKALQNNAIEEFKRYYRSV---DALFIDDIQFFANKDRS 239
               +    V     RF  + + A    A +E ++    +   + L +DD+Q   ++   
Sbjct: 164 DENAIFCGPVDELGTRF--EGLSATGAGAAQERQQARSRLCAHEVLVVDDLQRLRDQPFL 221

Query: 240 QEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAIL 299
           Q+E    F+   +   Q++        ++D +  +L+SR  WGL V +  P+L+ R+  +
Sbjct: 222 QDELTFAFDHFHDHGKQMVFACSGKLADLDFLSPKLRSRLEWGLIVELREPDLDVRLKFI 281

Query: 300 MRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDL 359
            ++++   I L  E +  +A+R R   R L+G L +V A      R I    + + LR  
Sbjct: 282 QQQSRSRNIQLSKEHSLTLAQRFRE-FRHLQGILVKVGAYRQLVNRDIQDRELEQILRHT 340

Query: 360 LALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSKELTNQSLPEIG 419
            + +   +T D +    AE + I   D++  +R + + + RQVAM L +EL   S P +G
Sbjct: 341 DSGKGNSLTPDAVIAATAEQFGIPARDIIGDKRQQHIVQARQVAMFLCRELLGSSFPALG 400

Query: 420 DAFGGRDHTTVLHACRKIAQLREESHDIK 448
             FGG+DH+T ++A RKI QL++   D++
Sbjct: 401 RVFGGKDHSTAMYAVRKIKQLQQSDKDMQ 429