Pairwise Alignments

Query, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 470 a.a., chromosomal replication initiator protein dnaA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  277 bits (708), Expect = 6e-79
 Identities = 145/440 (32%), Positives = 255/440 (57%), Gaps = 6/440 (1%)

Query: 3   VSLWQQCIGRLQDELSAQQFSMWIRPL-QAEMDGDTLVLYAPNRFVLDWVRDKYINIINQ 61
           V LW +C+  ++D +    ++ W  P+   + +  TL++  P++F  + + +K+++++ +
Sbjct: 7   VVLWNRCLEVIKDNVPETTYNTWFAPIVPLKYEDKTLIVQIPSQFFYEILEEKFVDLLRK 66

Query: 62  FFTEQMGNDAPKLRFDIGSRPSAKKPEPAPVAAVRVPSPQTKASV---GTAFNTTEPVAN 118
              + +G +  KL +++    ++   +   + A    +  T  S+     A +  +  A 
Sbjct: 67  TLYKAIG-EGTKLMYNVMVDKTSIPNQTVNLEASNRSTAVTPKSIVGGNKAPSFLKAPAV 125

Query: 119 TNHRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGG-AYNPLFLYGGTGLGKTHLLHA 177
            +   ++NP Y F+NF+EG SN+L ++ A  VA+NP G A+NPLFLYG +G+GKTHL +A
Sbjct: 126 QDLDPHLNPNYNFENFIEGYSNKLSRSVAEAVAQNPAGTAFNPLFLYGASGVGKTHLANA 185

Query: 178 VGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKD 237
           +G  I +   + +V+Y+ +  F      +++NN   +F  +Y+++D L IDDIQ FA   
Sbjct: 186 IGTKIKELYADKRVLYVSAHLFQVQYTDSVRNNTTNDFINFYQTIDVLIIDDIQEFAGVT 245

Query: 238 RSQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVA 297
           ++Q  FFH FN L +   Q+ILTSDR P  + G+E+RL +RF WG+   +E P +E R  
Sbjct: 246 KTQNTFFHIFNHLHQNGKQLILTSDRAPVLLQGMEERLLTRFKWGMVAELEKPTVELRKN 305

Query: 298 ILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALR 357
           IL  K    G+  P EV  +IA+ +  +VR+LEG +  ++A +    + I +D  +  + 
Sbjct: 306 ILRNKIHRDGLQFPPEVIDYIAENVNESVRDLEGIVIAIMARSTIFNKEIDLDLAQHIVH 365

Query: 358 DLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSKELTNQSLPE 417
            ++  + K VTID+I K V +++ ++ + + +K R R V + RQ+AM L+K  T+ S  +
Sbjct: 366 GVVHNETKAVTIDDILKVVCKHFDLEASAIHTKSRKREVVQARQIAMYLAKNYTDFSTSK 425

Query: 418 IGDAFGGRDHTTVLHACRKI 437
           IG   G +DH TVLHAC+ +
Sbjct: 426 IGKFIGNKDHATVLHACKTV 445