Pairwise Alignments

Query, 541 a.a., inner membrane protein, 60 kDa (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 554 a.a., membrane protein insertase YidC from Ralstonia sp. UNC404CL21Col

 Score =  365 bits (938), Expect = e-105
 Identities = 207/549 (37%), Positives = 309/549 (56%), Gaps = 33/549 (6%)

Query: 1   MESQRNILLIGLLFVSFLLWQQWQADKA------PKPVATESSVVANATTNHSADVPEAD 54
           M+ +R IL +       LL+  WQ          P P    ++  A  +T  + DVP++ 
Sbjct: 1   MDIKRTILWVIFSLAVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGSTP-AGDVPKSA 59

Query: 55  T--------GVPAAVAATQ----NLITVKTDQLDVQINPVGGDIVYAALVSHKLEQGKDQ 102
           +          PA  AA+Q      I + TD L   I+  G  +    L+  K   G   
Sbjct: 60  STTAAAGSQAAPATGAASQAPASEKIVISTDLLRATIDTDGAIVTKLELLDQKDHDGN-- 117

Query: 103 PFVLLEQTKDFTYIAQSGLIGRDGIDSSAKGRAIFAASKTEFTLADGQDSLEVPLTYVAE 162
           P VL +++ + TY+A+SGLIG D  + +     +FAAS     L  G D   V +T  A+
Sbjct: 118 PMVLFDRSVERTYLARSGLIGGDFPNHTT----VFAASAGPRDLGTGND---VSITLTAD 170

Query: 163 NG-VTYTKVFVFHRGKFNVNIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGA 221
            G     K +VF RG + ++  + + N   AP+   +Y ++ +     E S    T+ G 
Sbjct: 171 KGGAKLAKTYVFKRGSYVIDTRFDVTNDGTAPINPTLYLELARDGGAIEQSRFYSTFTGP 230

Query: 222 AFSTASVRYEKYNFEDM--GKNNLNQPTIGGWAAMLQHYFVSAWIPPATDSNTIFSSVSA 279
           A  T   ++ K  F D+  GK  +  PT  GW AM+QHYF SAWIP        + +   
Sbjct: 231 AVYTDGDKFHKITFADIDKGKAQVPAPTDSGWVAMVQHYFASAWIPADNVKREYYVNRVD 290

Query: 280 GGLANIGFRGAVYDVAPGATQEISSQFYVGPKDQKALSALSDTLNLVVDYGFLWWLAVPI 339
                IG +  +  VAPGA+   +++ + GP+  + L A++  L+LV DYG+L  +A P+
Sbjct: 291 NNFYRIGIQEPLGTVAPGASVSATARLFAGPQQARMLEAITPGLDLVKDYGWLTIVAKPL 350

Query: 340 HWLLMFYQSFVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDD 399
            WLL    + +GNWG +I+ +T+ ++ + FPL+   Y SMAKM++LQP++  ++ER   D
Sbjct: 351 FWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHKGD 410

Query: 400 RQKMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSV 459
            QKM Q MM LY+ EKVNP+GGCLPI++Q+P+F+ALYW LL S E+R AP++ W+HDLS 
Sbjct: 411 PQKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFMALYWALLSSVEMRGAPWIGWVHDLST 470

Query: 460 QDPYYILPLLMGVSMFIMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLWFPSGLVLYWLV 519
            DP+YILP+LM VSMF+  K+ P  P  DP+Q K+M +MP+ F+V F +FP+GLVLYW+V
Sbjct: 471 PDPFYILPVLMAVSMFVQTKLNPTPP--DPVQAKVMMFMPIAFSVMFFFFPAGLVLYWVV 528

Query: 520 GNIVAIIQQ 528
            N ++I QQ
Sbjct: 529 NNCLSIAQQ 537