Pairwise Alignments

Query, 541 a.a., inner membrane protein, 60 kDa (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 552 a.a., membrane protein insertase YidC from Burkholderia phytofirmans PsJN

 Score =  387 bits (994), Expect = e-112
 Identities = 208/545 (38%), Positives = 317/545 (58%), Gaps = 19/545 (3%)

Query: 1   MESQRNILLIGLLFVSFLLWQQWQADK--------APKPVATESSVVANATT--NHSADV 50
           M+ +R +L +     + +L+  WQ D         +  P  T  S     TT     AD+
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTVGSAAPGTTTPGTQPADL 60

Query: 51  PEADTGVPA-AVAATQN-LITVKTDQLDVQINPVGGDIVYAALVSHKLEQGKDQPFVLLE 108
           P  +   P  A AATQ+ L+   TD    +I+  GG +   +LV+    +  D    L +
Sbjct: 61  PATNAAAPGNAPAATQSQLVKFNTDVYSGEIDTRGGTLSKLSLVNKGDGKQPDLVITLFD 120

Query: 109 QTKDFTYIAQSGLIGRDGIDSSAKGRAIFAASKTEFTLADGQDSLEVPLTYVAENGVTYT 168
           +T + TY+A++GL+G D  + +     +      +  L   + S ++      + GV   
Sbjct: 121 RTANHTYLARTGLLGGDFPNHNDIYTPL---PNQQHDLTGDEKSFQLSFESPVKGGVKVI 177

Query: 169 KVFVFHRGKFNVNIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTASV 228
           K + F RG + + +D KI N   AP+   +Y ++ +  +P E+     T+ G A  T   
Sbjct: 178 KTYTFTRGSYVIGVDTKIQNVGTAPVTPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQH 237

Query: 229 RYEKYNFEDMGKNNLNQPTIG--GWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLANIG 286
            ++K  F D+ KN  +  T    GW AM+QHYF SAWIP       I+       L  +G
Sbjct: 238 HFQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDPALYRVG 297

Query: 287 FRGAVYDVAPGATQEISSQFYVGPKDQKALSALSDTLNLVVDYGFLWWLAVPIHWLLMFY 346
            +  V  +APG T ++S++ + GP++++ L  ++  L LV DYG++  +A P+ WLL   
Sbjct: 298 VKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKI 357

Query: 347 QSFVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDDRQKMGQA 406
            S+VGNWG +I+L+TL ++ + FPL+ A Y SMA+M+ + P++Q L+ERF  D QKM  A
Sbjct: 358 HSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNSA 417

Query: 407 MMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYYIL 466
           +MELYK EKVNP GGCLP+++Q+P+FI+LYWVLL S E+R AP++LWIHDLS QDP++IL
Sbjct: 418 LMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPFFIL 477

Query: 467 PLLMGVSMFIMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLWFPSGLVLYWLVGNIVAII 526
           P+LM VSMF+  K+ P  P  DP+Q KMM +MP+ F+V F +FP+GLVLY++V N+++I 
Sbjct: 478 PVLMAVSMFLQTKLNPTPP--DPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIA 535

Query: 527 QQKII 531
           QQ  I
Sbjct: 536 QQYYI 540