Pairwise Alignments

Query, 541 a.a., inner membrane protein, 60 kDa (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 541 a.a., protein translocase subunit yidC (RefSeq) from Shewanella sp. ANA-3

 Score = 1056 bits (2730), Expect = 0.0
 Identities = 521/540 (96%), Positives = 532/540 (98%)

Query: 1   MESQRNILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTGVPAA 60
           MESQRNILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADT VPAA
Sbjct: 1   MESQRNILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTSVPAA 60

Query: 61  VAATQNLITVKTDQLDVQINPVGGDIVYAALVSHKLEQGKDQPFVLLEQTKDFTYIAQSG 120
           + ATQNLITVKTDQLDVQINPVGGDIV+AALVSHKLEQGKDQPFVLLEQTKDFTYIAQSG
Sbjct: 61  LTATQNLITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLLEQTKDFTYIAQSG 120

Query: 121 LIGRDGIDSSAKGRAIFAASKTEFTLADGQDSLEVPLTYVAENGVTYTKVFVFHRGKFNV 180
           LIGRDGIDSSAKGRA FAA+KTEFTLADGQD+LEVPLTYVA+NGVTYTKVFVFHRGKFNV
Sbjct: 121 LIGRDGIDSSAKGRAAFAANKTEFTLADGQDTLEVPLTYVADNGVTYTKVFVFHRGKFNV 180

Query: 181 NIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTASVRYEKYNFEDMGK 240
           +IDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFST  VRYEKY FEDM K
Sbjct: 181 DIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEKYKFEDMSK 240

Query: 241 NNLNQPTIGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLANIGFRGAVYDVAPGATQ 300
           +NLNQPT+GGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLANIGFRGAVYD+APGATQ
Sbjct: 241 SNLNQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLANIGFRGAVYDIAPGATQ 300

Query: 301 EISSQFYVGPKDQKALSALSDTLNLVVDYGFLWWLAVPIHWLLMFYQSFVGNWGVAIILI 360
           EISSQFYVGPKDQKALSALSDTLNLVVDYGFLWWLAVPIHWLLMFYQSFVGNWGVAIILI
Sbjct: 301 EISSQFYVGPKDQKALSALSDTLNLVVDYGFLWWLAVPIHWLLMFYQSFVGNWGVAIILI 360

Query: 361 TLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDDRQKMGQAMMELYKKEKVNPMG 420
           TLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDDRQKMGQAMMELYKKEKVNPMG
Sbjct: 361 TLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDDRQKMGQAMMELYKKEKVNPMG 420

Query: 421 GCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYYILPLLMGVSMFIMQKM 480
           GCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYYILPLLMG SMF+MQKM
Sbjct: 421 GCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYYILPLLMGASMFVMQKM 480

Query: 481 QPIAPTMDPMQVKMMQWMPVIFTVFFLWFPSGLVLYWLVGNIVAIIQQKIIYAGLEKKGL 540
           QPIAPTMDPMQVKMMQWMP+IFTVFFLWFPSGLVLYWLVGNIVAIIQQKIIYAGLEKKGL
Sbjct: 481 QPIAPTMDPMQVKMMQWMPMIFTVFFLWFPSGLVLYWLVGNIVAIIQQKIIYAGLEKKGL 540