Pairwise Alignments

Query, 877 a.a., alanine--tRNA ligase from Lysobacter sp. OAE881

Subject, 874 a.a., alanyl-tRNA synthetase from Herbaspirillum seropedicae SmR1

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 547/878 (62%), Positives = 643/878 (73%), Gaps = 11/878 (1%)

Query: 4   TTEIRSDFLEFFRGKAHTIVPSAPLVPANDPTLLFTNSGMVQFKNVFLGSEKPGYVRAAD 63
           + EIR  FL+FF  K HTIV S+ LVP NDPTLLFTNSGMVQFK+VFLG++K  YVRAA 
Sbjct: 3   SAEIRDKFLKFFESKEHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGTDKRNYVRAAS 62

Query: 64  VQRCLRAGGKHNDLDQVGYTARHHTFFEMLGNWSFGDYFKEDAITWAWELLTKVWGLPAE 123
           VQRCLRAGGKHNDL+ VGYTARHHTFFEMLGNWSFGDYFK +++ WAWELLT+V+GLPA+
Sbjct: 63  VQRCLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTQVYGLPAD 122

Query: 124 RLTVTVYHTDDEAYAIWNKKIGVPAERIVRIGDNKGAPFASDNFWQMADTGPCGPCTEIF 183
           +L  TVY TDDEAY IW K IG+P ER+VRIGDNKGAP+ASDNFWQMA+TGPCGPC+EIF
Sbjct: 123 KLWATVYQTDDEAYDIWTKDIGLPPERVVRIGDNKGAPYASDNFWQMAETGPCGPCSEIF 182

Query: 184 YDHGAHIAGGPPGSPDEDGDRFIEIWNLVFMQFDRQPDG-----TLEPLPAPCVDTGMGL 238
           YDHG  + GGPPGSPD DGDR+IEIWN VFMQFDRQ D      TL PLPAPCVDTGMGL
Sbjct: 183 YDHGPDVWGGPPGSPDADGDRYIEIWNNVFMQFDRQLDPATGEYTLTPLPAPCVDTGMGL 242

Query: 239 ERLAAVLQGVHGNYEIDLFRHLIAKAAEFTSTTDLDNKSLRVIADHIRACAFLIVDGVLP 298
           ERLAA+LQ VH NYEIDLF+ LI  AA  T  TDL N SLRVIADHIRA +FLIVDGV+P
Sbjct: 243 ERLAAILQHVHSNYEIDLFQALIKAAARETGETDLSNASLRVIADHIRATSFLIVDGVIP 302

Query: 299 SNEGRGYVLRRIIRRALRHGWMLGQKGPFFHRMVAPLVEVMGDAYPELTAKREFVERALL 358
            NEGRGYVLRRIIRRALRHG  LGQ  PFFH++V  LV  MG AYPEL    E VE  L 
Sbjct: 303 GNEGRGYVLRRIIRRALRHGHKLGQTKPFFHKLVKDLVVQMGAAYPELPEAAERVEMVLK 362

Query: 359 AEEERFAETLDAGMRIFDEVAARSNTTIPGVDAFRLYDTYGFPVDLTADIARERGLSVDM 418
            EEERF ETL+ GM+I +   A +   + G  AF LYDTYGFP+DLTADI RER + +D 
Sbjct: 363 QEEERFGETLEHGMKILEAALAANTGKLDGETAFTLYDTYGFPLDLTADICRERNVELDE 422

Query: 419 AGFEAAMEQQRETARAAGKFGNTATMPAELAAQLAPTQFLGYEQLSDEGLEIVALLKNGR 478
           AGF AAME+Q+  ARAAGKF     M A +      T+F+GYE L+ +  ++VAL   G 
Sbjct: 423 AGFTAAMERQKSAARAAGKF----KMAAAIEYTGDKTRFVGYESLA-QSAKVVALYVAGS 477

Query: 479 AVDRIEAGEEAAVILDRTPFYAESGGQVGDTGDLEAGDARFAVRDTVKFAGQFHGHVGTL 538
            V +IEAG++A V+LD TPFYAESGGQ GD G LEA +  FAV DT K   +  GH G L
Sbjct: 478 PVQKIEAGQDAIVVLDTTPFYAESGGQCGDAGALEAANGLFAVADTQKIQAEVFGHHGQL 537

Query: 539 ASGSLKRGDRVRATVDTVRRAATVLNHSATHLLHSALRSVLGDHVVQKGSLVAPDRLRFD 598
             GSL  GD V+A VD  +RA T+ NHSATHL+H ALR VLG HV QKGSLV  D+ RFD
Sbjct: 538 IKGSLAVGDAVQAKVDADQRARTMRNHSATHLMHKALREVLGSHVSQKGSLVDADKTRFD 597

Query: 599 FSHFAPVSAGELAEIERRVNAEIRRNHAAEVHHMGMQEALDFGAMALFGEKYGDNVRVLR 658
           FSH AP++A E+  +E  VN E+  N A     MG  +A+  GAMALFGEKYGD VRVL 
Sbjct: 598 FSHNAPMTAEEIRRVEEIVNREVLANVATGAQLMGYDDAIAAGAMALFGEKYGDQVRVLS 657

Query: 659 MGDTSTELCGGTHVSRTGDIGLFKIVSEGGVSAGVRRIEALTGQGALDFVAEEEHRLDEA 718
           +G TSTELCGGTHV+RTGDIGLFKIVSEGGV+AG+RR+EA+TG+GAL  V     R+ EA
Sbjct: 658 IG-TSTELCGGTHVTRTGDIGLFKIVSEGGVAAGIRRVEAVTGEGALALVQSLSSRVAEA 716

Query: 719 ARLLGGNAADVSDKLRSLLDRQKKLERELESLKAKAASGATADLASSAAQVAGVKVVATR 778
           A  L     ++  ++  + D+ K LE+EL SLK+K AS    +L + A  + G+KV+A  
Sbjct: 717 AAALKTQPEELLPRIGQVQDQVKALEKELASLKSKLASSQGDELVNQAVDINGIKVLAAT 776

Query: 779 LEGFDAKALRDAVDRLKQQMGDAVIVLAGASEGKAALVAGVNGSAAGKVKAGELLAHVAS 838
           LEG D   LR+ +D+LK ++  A IVL    +GK +L+AGV   A  KVKAGEL+  VA 
Sbjct: 777 LEGADVATLRETMDKLKDKLKTAAIVLGSVKDGKVSLIAGVTADATAKVKAGELVNFVAQ 836

Query: 839 RINGKGGGRPDMAQGGGDDGPALVQVLAEVPAWVESKL 876
           ++ GKGGGRPDMAQ GG +  AL   L  V  WV+SKL
Sbjct: 837 QVGGKGGGRPDMAQAGGTEPAALPGALQGVAGWVQSKL 874