Pairwise Alignments

Query, 394 a.a., multidrug transporter EmrD from Klebsiella michiganensis M5al

Subject, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  319 bits (818), Expect = 8e-92
 Identities = 159/372 (42%), Positives = 242/372 (65%), Gaps = 3/372 (0%)

Query: 9   LLLMLVLLVAVGQMAQTIYIPAIADMAVSLNVREGAVQSVMAAYLLTYGVSQLFYGPLSD 68
           L   + +L AVGQ  QT+Y+P+I  MA    V   A+Q+VMA YL+ YG+SQ  YG LSD
Sbjct: 23  LTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSD 82

Query: 69  RVGRRPVILVGMSIFMLATLVAITTHSLPVLIAASAMQGMGTGVGGVMARTLPRDLYEGA 128
           R+GR+P+I+ G++I+++ +L+A+  H     +  S +QG+G G GG M+RTL RD +EGA
Sbjct: 83  RIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGA 142

Query: 129 QLRHANSLLNMGILVSPLLAPLIGGILDTLWNWRACFVFLLVLCAGVTFSMARWMPETRP 188
           +L   NSL++M ++ SPL+AP++GG L   + WR+ ++FL +    V  +M   M ET P
Sbjct: 143 ELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLP 202

Query: 189 -TGAPRTRLITNYKTLFGTGAFNCYLLMLIGGLAGIAVFEACSGVLMGAVLGLSSMSVSI 247
            T   +  ++ +Y  +     F  YL+ L+   AG+AVFEA +GVL+G VLGL + +VS+
Sbjct: 203 ATARKKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSL 262

Query: 248 LFILPIPAAFFGAWFAG--RPNKRFPTLMWQSVICCLLAGVLMWIPGLLGVMTVWTLLVP 305
           LF+LPIP    GAW +     + R  T M   ++  L   +++ +PGLLG+ T  +L+  
Sbjct: 263 LFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGG 322

Query: 306 AALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLAWLSAMMPQTGQGSL 365
           A ++F GAG+LFP AT+GA+ PFP+ AGT GA++GG+QN+G+G+    +AM P + Q  L
Sbjct: 323 ATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASDQLPL 382

Query: 366 GLLMMLMGLLIL 377
           G++M+LM +L L
Sbjct: 383 GIIMLLMSVLAL 394