Pairwise Alignments

Query, 378 a.a., secretion protein HlyD from Klebsiella michiganensis M5al

Subject, 354 a.a., multidrug resistance efflux pump (RefSeq) from Shewanella amazonensis SB2B

 Score =  113 bits (282), Expect = 9e-30
 Identities = 82/247 (33%), Positives = 125/247 (50%), Gaps = 7/247 (2%)

Query: 52  PYTFTAQKAVISIPITPQVTGVVSSVTDKANQRVKKGEVLFTIDPARYQARVDRLQADLV 111
           P T  A      + ITP+V G +  V    ++RV+ GE+LF ID  +YQ   ++ QADL 
Sbjct: 34  PMTTQAFVHAYLVRITPEVAGNIVQVNVDNDKRVEAGELLFEIDATQYQIAREKAQADLE 93

Query: 112 TALHSINTLKAQLSEAQANTTRVSAERDRLYKDYQRYLKGSQARVNPFSESDIDNARQNY 171
               S+    A +  AQA      A  D       R    + A     S++++DNAR+  
Sbjct: 94  RVGQSLGASTAAVQVAQAKVGDARAALDNAKAQATRV--ETLAERGVLSQAELDNAREAA 151

Query: 172 LAQDAMVKGSVAEQAQIQSQLDSIINGEQS-QVVSLRAQLAEAKYNLDQTTVRAPSDGYI 230
               A ++ + A   Q +  L  +  GE + ++ +  A LA+A+ +L +T V APS G +
Sbjct: 152 QRAQASLEAAQASLLQAKQNLGPV--GENNPELKAAMAALAKAELDLKRTRVVAPSRGVV 209

Query: 231 TQVLIRPGTYAASLPLRPVMVFIPQQKRLIVAQFRQNSLLRLEKGDDAEAVFNALPGQVF 290
           T V + PG Y A  P +P + FI  ++  I A  R+NSL  + +G     VF+ALPG+VF
Sbjct: 210 TNVQLSPGQYMA--PGQPALTFIDPREVWISAMMRENSLEHIREGGKVGLVFDALPGRVF 267

Query: 291 RGKLVSI 297
            G + SI
Sbjct: 268 EGVVDSI 274