Pairwise Alignments

Query, 613 a.a., selenocysteine-specific translation factor from Klebsiella michiganensis M5al

Subject, 394 a.a., translation elongation factor Tu (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  132 bits (332), Expect = 3e-35
 Identities = 100/335 (29%), Positives = 160/335 (47%), Gaps = 37/335 (11%)

Query: 3   IATAGHVDHGKTTLLQAITGINA-------------DRLPEEKARGMTIDLGYAYWPQPD 49
           + T GHVDHGKTTL  AI+ + A             D  PEE+ RG+TI+  +  +  P 
Sbjct: 15  VGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERGITINTSHIEYDTPS 74

Query: 50  GRVLGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGKPTLTV 109
            R    +D PGH  ++ NM+ G   +D A+LVVA  DG M QTREH+ + +  G P + V
Sbjct: 75  -RHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVPFIIV 133

Query: 110 ALTKADRVETAR-VEEVKAEAEAALAEFGFTGATLFTVAATEGLGIAGLRD---HLLQLS 165
            + K D V+ A  +E V+ E    L+E+ F G  L  +  +    + G  +    +L+L+
Sbjct: 134 FMNKCDMVDDAELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALEGEPEWEAKILELA 193

Query: 166 ARAH---PQHQR-----FRLAIDRAFTVKGAGLVVTGTALSGEVNVGDTLWLTGVDKPMR 217
           A      P+ +R     F + I+  F++ G G VVTG    G V VGD + + G+    +
Sbjct: 194 AALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVGDEVEIVGIRTTTK 253

Query: 218 V--RGLHAQNQPVAKAWAGQRIALNIVGDAQKEDLNRGDWLL---AVPPPEASERVIVEL 272
               G+    + + +  AG+   + + G  +++D+ RG  L    ++ P    E  +  L
Sbjct: 254 TTCTGVEMFRKLLDEGRAGENCGILLRG-TKRDDVERGQVLSKPGSINPHTTFESEVYVL 312

Query: 273 Q-----CHTPLSQWQPLHIHHAASHITGRVSLLEG 302
                  HTP  +      +   + +TG + L EG
Sbjct: 313 SKEEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEG 347