Pairwise Alignments

Query, 613 a.a., selenocysteine-specific translation factor from Klebsiella michiganensis M5al

Subject, 642 a.a., selenocysteine-specific translation elongation factor (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  273 bits (698), Expect = 2e-77
 Identities = 203/643 (31%), Positives = 310/643 (48%), Gaps = 44/643 (6%)

Query: 1   MIIATAGHVDHGKTTLLQAITGINADRLPEEKARGMTIDLGYAYWPQPDGRVLGFIDVPG 60
           +I+ TAGH+DHGKT+L++A+TGI+ DRL EEK RG+TI+LG+A+   P G  LG +DVPG
Sbjct: 3   VIMGTAGHIDHGKTSLVRALTGIDCDRLDEEKRRGITIELGFAFCDLPGGGRLGVVDVPG 62

Query: 61  HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGKPTLTVALTKADRVETA 120
           HEKF+ NM+AG  G+D  +LV+A D+GVM QTREHL I  L G     VALTK D V+  
Sbjct: 63  HEKFVRNMVAGASGVDFVMLVIAADEGVMPQTREHLEICSLLGIRHGLVALTKVDMVDAD 122

Query: 121 RVEEVKAEAEAALAEFGFTGATLFTVAATEGLGIAGLRDHLLQLSARAHPQHQR--FRLA 178
            +E  + +    LA     GA +F V+A  G G+  LR+HL  L     P+ +   FRL 
Sbjct: 123 WLELAQDDVAGFLAGTFLEGAPIFPVSAVTGQGLDTLREHLATLERELRPERRTDLFRLP 182

Query: 179 IDRAFTVKGAGLVVTGTALSGEVNVGDTLWLTGVDKPMRVRGLHAQNQPVAKAWAGQRIA 238
           +DR FT++G G VVTGT +SG + VGD + L    +  +VRGL +   PV KA AG+R A
Sbjct: 183 VDRVFTMRGHGTVVTGTMISGSLKVGDDVVLYPEGRTSKVRGLQSHGGPVDKALAGRRTA 242

Query: 239 LNIVGDAQKEDLNRGDWLLAVPPPEASERVIVELQCHT----PLSQWQPLHIHHAASHIT 294
           +N+ G     ++ RG+ L        ++R  V L C +    PL     +H HH A  + 
Sbjct: 243 VNLQG-VDVAEVQRGEVLALPGTLFPAQRWDVRLTCLSSAARPLRNRTEVHFHHGAREVL 301

Query: 295 GRVSLL--------EGALAELVLDTPLRLADNDRLVLRDISARLTLAGARVVTLNPPRRG 346
            R+           E AL ++    P+     DR V+R  S   T+AG  VV        
Sbjct: 302 ARLHFHDRDRLNPGETALCQVRFTEPMVGVFGDRCVVRTFSPLRTVAGGVVVNPTGHDLR 361

Query: 347 KRKPEYLQWLHALA----AAQGDDVQA--------------LDIHLQRDAVRLDDFAWAR 388
           +R P +   +  LA    A + + VQA              L +    ++ RL+    A 
Sbjct: 362 RRDPHFADKVALLASLPEATEEELVQAHVDLSGNAGAGFVRLSVLTDLESKRLEKVLQA- 420

Query: 389 QLSDEGLKALINRPDYLQAGNSLLSAPLAARWQRKLLDALARYHDQHRDEPGPGRERLRR 448
            L   G     +R +    G   L A  A       LD    +H +   +PG  R  L  
Sbjct: 421 -LGARGRLFCFDREERAYVGADALQALSAG-----CLDHAGAFHAKEPLKPGMARGVLAS 474

Query: 449 IALPMEDEALVLLLIEQMRESGTVHSHHGWLHLPEHKAGFTDEQQAIWQRVVGLFAD--- 505
                    L+  ++E++ + G + +    L LP HK     +Q+ +  +++ ++++   
Sbjct: 475 GWGRGLHPRLIHFVVERLIKQGALVAEGDVLRLPGHKVSLASDQEGLRGKLLAIYSEAGM 534

Query: 506 EPWWVRDLAREANVEESLMRAVLRQAAQQGMITAIVKDRYYRNDRIVAFAKMIRELDLER 565
            P  ++D+    ++E+     VL+     G +  +     +    +      +     + 
Sbjct: 535 TPPNLKDVLETLSLEQKEAAPVLKLLHDGGELVRVKDGLLFHRSALDELKGRVARWFDDH 594

Query: 566 GSTCAADFRD-TLNVGRKLAIQILEYFDRIGFTRRRGNDHILR 607
                + F++ +  + RK  I +LEYFDR   T R G+   LR
Sbjct: 595 DDLDPSGFKELSGGLSRKYIIPLLEYFDRERVTIRVGDKRQLR 637