Pairwise Alignments

Query, 513 a.a., xylose ABC transporter ATP-binding protein from Klebsiella michiganensis M5al

Subject, 518 a.a., sugar ABC transporter from Herbaspirillum seropedicae SmR1

 Score =  538 bits (1385), Expect = e-157
 Identities = 274/502 (54%), Positives = 370/502 (73%), Gaps = 3/502 (0%)

Query: 3   WLLEMKNITKTFGAVKAIDNVSLRLNAGEVVSLCGENGSGKSTLMKVLCGIYPHGSYEGE 62
           +LLEMK I K+FG V+A++ + +++  GE V LCGENG+GKSTLMK+L G+YPHG++EGE
Sbjct: 4   YLLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGE 63

Query: 63  IIFSGETLQPGHIRDTERKGIAIIHQELALVKHLTVLENIFLGAEISRHG-LLDYETMTL 121
           I++ G+ LQ   +RDTE  GI IIHQEL LV  L+V ENIF+G EI+  G  ++Y  M  
Sbjct: 64  ILWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPAMYR 123

Query: 122 RCEKLLAQVNLA-ISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETAI 180
           R E+L+ ++N+  I+    V   G G QQLVEIAKALNK  RLLILDEP++SLT  E  +
Sbjct: 124 RAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASEIGV 183

Query: 181 LLNIIRDLQNHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRNADGMSEDDIITMMVG 240
           LL II+DL+  G+AC+YISHKL+EV  + DTI VIRDG+HI T     M  D IIT MVG
Sbjct: 184 LLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQMVG 243

Query: 241 RELTALYPSEAHSCGDEILRVENLTAWHPVNRHIKRVNDVSFSLRRGEILGIAGLVGAGR 300
           RE+TA+YP   H+ G+ +L   N+T +   N   KRV+DVSFS+RRGEILGIAGLVGAGR
Sbjct: 244 REITAMYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVGAGR 303

Query: 301 TEAVQCLFGVWPGRWQGKIFIDGQPVTIHTCQQAIAQGIAMVPEDRKKDGIVPVMAVGKN 360
           TE V  +FG + GR++G++ ++G+P    +  ++I +G+ MVPEDRK  GIVP + VG+N
Sbjct: 304 TELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDVGQN 363

Query: 361 ITLAALNQFTGPLSSLDDAGEQLCIQQSIQRLKIKTSSPELAIGRLSGGNQQKAILARCL 420
           ITL  LN+F+   S +D + E   IQ  I R+++KT++P L I  LSGGNQQKA+LA+ L
Sbjct: 364 ITLTVLNRFSRG-SRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGNQQKAVLAKML 422

Query: 421 LLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMHE 480
           L  P++LILDEPTRG+D+GAK EIY+LI++L + G+A+I++SSEL EVLG+SDRVLV+ E
Sbjct: 423 LAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGLAIIMVSSELAEVLGVSDRVLVIGE 482

Query: 481 GKLKANLINQGLTQEQVMEAAL 502
           G+L+ + +N  L+QE V+ AA+
Sbjct: 483 GRLRGDFVNDNLSQETVLAAAI 504



 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 9/241 (3%)

Query: 18  KAIDNVSLRLNAGEVVSLCGENGSGKSTLMKVLCGIYPHGSYEGEIIFSGETLQPGHIRD 77
           K +D+VS  +  GE++ + G  G+G++ L+  + G Y  G YEG+++  G+         
Sbjct: 278 KRVDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAY-RGRYEGQVLLEGKPADTSSPLK 336

Query: 78  TERKGIAIIHQEL---ALVKHLTVLENIFLGA--EISRHGLLD--YETMTLRCEKLLAQV 130
           + R+G+ ++ ++     +V  L V +NI L      SR   +D   E  T++ E    +V
Sbjct: 337 SIRRGLCMVPEDRKHHGIVPDLDVGQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRV 396

Query: 131 NLAISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETAILLNIIRDLQN 190
             A +P   +  L  G QQ   +AK L  Q ++LILDEPT  +     A +  +I +L  
Sbjct: 397 KTA-TPFLPITSLSGGNQQKAVLAKMLLAQPKVLILDEPTRGVDVGAKAEIYRLISELAK 455

Query: 191 HGIACIYISHKLNEVKAISDTICVIRDGQHIGTRNADGMSEDDIITMMVGRELTALYPSE 250
            G+A I +S +L EV  +SD + VI +G+  G    D +S++ ++   + + +    P  
Sbjct: 456 AGLAIIMVSSELAEVLGVSDRVLVIGEGRLRGDFVNDNLSQETVLAAAINQPVPQATPRA 515

Query: 251 A 251
           A
Sbjct: 516 A 516