Pairwise Alignments

Query, 280 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Klebsiella michiganensis M5al

Subject, 281 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  279 bits (714), Expect = 4e-80
 Identities = 135/282 (47%), Positives = 194/282 (68%), Gaps = 3/282 (1%)

Query: 1   MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKEKPFLYLDTHAGAGRYQLSSEHAERTGE 60
           MLSYRH +HAGN+ADVLKH +    ++ + +K+KP +Y+DTHAGAG Y L+ E A++TGE
Sbjct: 1   MLSYRHGYHAGNYADVLKHAMLLQTLQLMHKKDKPLVYIDTHAGAGGYALTDEFAQKTGE 60

Query: 61  YLEGIARIWQQDDLPAELEPYVSVVQHFNRSG--QLRYYPGSPLIARQLLREQDSLQMTE 118
           YL+G+A++W + DLP  L+ YV  V+HFN     +L +YPGSP      L  +D + + E
Sbjct: 61  YLDGVAKLWNKTDLPKSLQDYVDAVRHFNEDNPEELNFYPGSPAFIDMDLGPKDRMVLHE 120

Query: 119 LHPSDFPLLRAEFQKDDRARVEKTDGYQQLKSKLPPVSRRGLVLIDPPYEIKSDYQAVVT 178
           LH +D  LL   F++D + +V K DG + L + +PP+ RR LVL+DP YEIK+DYQ V  
Sbjct: 121 LHGTDHLLLDEYFEQDKQVKVIKGDGLKGLIAAVPPLERRALVLVDPSYEIKTDYQTVAD 180

Query: 179 GIHEGYKRFATGTYALWYPVVLRAQIKRMIKELEATGIRKILQIELAVRPDSDQRGMTAS 238
            + + +KRFATG + LWYPVV RAQ + M+  L  +GI++ L+IE A++PDS++ GMTA+
Sbjct: 181 TLIKAHKRFATGVFMLWYPVVNRAQTEEMLSRLANSGIKRQLRIEQAIKPDSNEFGMTAA 240

Query: 239 GMIVINPPWKLEQQMNNVLPWLHKKLVPTGIGHATVSWIVPE 280
           G+ VINPPW+L++  N ++ +L K L     GH +V W V E
Sbjct: 241 GLWVINPPWQLDEIANEMVDYLGKTLGQAD-GHVSVKWEVGE 281