Pairwise Alignments

Query, 280 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Klebsiella michiganensis M5al

Subject, 273 a.a., external DNA uptake/catabolism protein from Caulobacter crescentus NA1000

 Score =  137 bits (345), Expect = 3e-37
 Identities = 85/267 (31%), Positives = 123/267 (46%), Gaps = 2/267 (0%)

Query: 2   LSYRHSFHAGNHADVLKHTVQSLIIESLKEKEKPFLYLDTHAGAGRYQLSSEHAERTGEY 61
           ++YRH+FHAGN AD+ KH +   ++ +L+EK      +DTHAGAG Y L+ E A R+GE 
Sbjct: 1   MNYRHAFHAGNFADLHKHAILLAMLSALQEKSPALAVIDTHAGAGGYDLAGEMARRSGEA 60

Query: 62  LEGIARIWQQDDLPAELEPYVSVVQHFNRSGQLRYYPGSPLIARQLLREQDSLQMTELHP 121
             GI R+    D PA  +P ++ +   N       YPGSP +  + LR  D     EL  
Sbjct: 61  QAGIFRLKAAADAPAVFQPLLNAITQMNGGKDGDLYPGSPRLMARALRGADRYVGCELRD 120

Query: 122 SDFPLLRAEFQKDDRARVEKTDGYQQLKSKLPPVSRRGLVLIDPPYEIKSDYQAVVTGIH 181
            D  LLR        AR  + DG+     K      R  ++IDPP+E   DY  +V    
Sbjct: 121 DDADLLRKTLAPCANARALQADGF-DTAVKDAGKGGRAFIVIDPPFERPDDYDRIVATTR 179

Query: 182 EGYKRFATGTYALWYPVVLRAQIKRMIKELEATGIRKILQIELAVRPDSDQRGMTASGMI 241
               R      A+W P+         ++ +E T    +L  EL +RP +D   M    M+
Sbjct: 180 AVLARAPDAALAIWLPIKDLETFDAFLRAME-TVTSDLLVAELRLRPLTDPMKMNGCAMV 238

Query: 242 VINPPWKLEQQMNNVLPWLHKKLVPTG 268
           +I  P  +E        W+  +L   G
Sbjct: 239 MIGAPPSVEDAAVAAGDWIATRLGEPG 265