Pairwise Alignments

Query, 627 a.a., sigma-54-dependent Fis family transcriptional regulator from Klebsiella michiganensis M5al

Subject, 546 a.a., propionate catabolism operon regulatory protein PrpR from Pseudomonas sp. BP01

 Score =  230 bits (587), Expect = 1e-64
 Identities = 130/329 (39%), Positives = 197/329 (59%), Gaps = 14/329 (4%)

Query: 305 RGFSTTWSFDDIIGQSPAILDVIKKAKLCARHELPIHILGDTGTGKELFAQSIHNHSARS 364
           R F     F+ ++G +PA   ++  A+  A+ +  + I G++GTGKEL AQS+H+ S R 
Sbjct: 219 RPFKARHRFEQLLGDTPAFRAMLGLAQRYAQADATVLITGESGTGKELLAQSMHHASPRQ 278

Query: 365 HSPFIAINCAAIPEGILESELFGYADGAFTSARKGGKPGVFEMAMNGTVFIDEISEAPLS 424
             PF+AINCAA+PE +LESELFGY DGAFT +RKGGKPG+ E+A  GT+F+DEI + P++
Sbjct: 279 EGPFVAINCAALPESLLESELFGYEDGAFTGSRKGGKPGLIELAHTGTLFLDEIGDMPVA 338

Query: 425 VQVKLLRVLQEKQFSRLGGDTLITADFRLITASNKDLRPLVASGEFRQDLYYRINILELS 484
           +Q +LLRVLQE++  RLG       D R+I A++ DL   +A   FRQDLYYR+NIL L+
Sbjct: 339 LQTRLLRVLQEREVLRLGACEPTPVDIRVIAATHCDLPARIADQRFRQDLYYRLNILRLA 398

Query: 485 LPALCQRPGDIMPLIQHLLHQQGKQITFTPDA-------VDFLHGYRWPGNIRELQAVIY 537
           +P L +R  DI+PL   LL +  +     P +       +  +  + WPGNIREL+ +  
Sbjct: 399 VPPLRERIADILPLFNALLARHCRAGRLPPSSDEQIQKLLPLMLRHPWPGNIRELENIAE 458

Query: 538 RLIVLVDIDRVSKEILLQVSQISPDDDNEG----SHLPATGVTSDETDLLKKQEKRLITH 593
           R+ + +       E+   ++ + P+    G     +LP    T +   L K  E      
Sbjct: 459 RVALCLGTLGHGDEV--DLATLFPELFEAGVAAAVNLP-PAATDNLRSLGKAAETAHARQ 515

Query: 594 VIEKTDGDRTKASVMLGISPTTLWRKLKQ 622
           V++  DGD  +A+  LG+S +T+WR++++
Sbjct: 516 VLDCCDGDMHEAARRLGVSRSTVWRRVRR 544