Pairwise Alignments

Query, 653 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Klebsiella michiganensis M5al

Subject, 599 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  578 bits (1490), Expect = e-169
 Identities = 317/607 (52%), Positives = 416/607 (68%), Gaps = 21/607 (3%)

Query: 1   MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF 60
           M+  E TF +LGL  P+L AL++LGYEKP+PIQA  I  L+ G+D+LG AQTG+GKT AF
Sbjct: 1   MSSSEKTFRELGLSEPLLRALDELGYEKPTPIQAASIDPLMAGKDILGQAQTGTGKTGAF 60

Query: 61  SLPLLNNLDPELRAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR 120
           +LPLLN +DP    PQILVLAPTRELAVQVAEA   +SK M+G++V+ +YGGQ    QL 
Sbjct: 61  ALPLLNAIDPNRNVPQILVLAPTRELAVQVAEAFGSYSKFMKGLHVLPIYGGQSMHQQLN 120

Query: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180
           ALR+GPQIVVGTPGR++DH++RGTL L  L+ LVLDEADEML+MGFI+D+E I+   P+ 
Sbjct: 121 ALRRGPQIVVGTPGRVMDHMRRGTLKLETLNALVLDEADEMLKMGFIDDIEWILEHTPQE 180

Query: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL 240
            Q ALFSATMPE I+R+  ++++ P  + I +S TT   I Q +       K EALVR L
Sbjct: 181 RQLALFSATMPEQIKRVANKYLQTPVHISIAASHTTVESIEQRFVQVSQHNKLEALVRVL 240

Query: 241 EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRLDILI 300
           E E+ +  IIFVRT+N+ +E+AE LE  GY+S+ L+GDMNQ  RE+ +++LK G+LDILI
Sbjct: 241 EVENTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVDQLKRGKLDILI 300

Query: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360
           ATDVAARGLDVERI  V+NYDIP D+E+YVHRIGRTGRAGR G A+LFV +RE R+LR I
Sbjct: 301 ATDVAARGLDVERIGHVINYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTHREMRMLRTI 360

Query: 361 ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD 420
           ER  K  I  + +P+ E + +RRL +   +V   +++  LD     +A++    +  E+D
Sbjct: 361 ERATKSRISPMNVPSPETVAERRLSRLGEQVSNTIDNESLDFMHGAVAQL---CQQLEVD 417

Query: 421 VETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFER-RGDRNDRGPRGDR----- 474
            E LAAALL M Q ERPL LPP      +R+   RD+R  R RGDR+DR PRG R     
Sbjct: 418 TEVLAAALLNMVQQERPLQLPP----IQERQRDSRDERNSRDRGDRSDRAPRGRRESRPT 473

Query: 475 PERSGEDRPKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGS 534
           P   G+    ++  DV  M  Y ++VGRD GV V +IVGA+ANE +I SRYIG I+LF  
Sbjct: 474 PANLGQADTLKDHPDV-KMCRYVLDVGRDHGVGVGNIVGAVANEANIDSRYIGQIQLFDQ 532

Query: 535 HSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLG----DAQPRPERSGERRGGGER---R 587
            ++I+LP+GMP +VLQH  + R+  KP+N++  G    +A         R+  GER   R
Sbjct: 533 ITSIDLPEGMPKDVLQHLKKVRVCGKPLNIREAGSEIVNASDDNRAPRRRKPVGERKSHR 592

Query: 588 EGGRSFG 594
           +G R  G
Sbjct: 593 KGNRDNG 599