Pairwise Alignments

Query, 322 a.a., membrane protein from Klebsiella michiganensis M5al

Subject, 325 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  261 bits (668), Expect = 1e-74
 Identities = 143/324 (44%), Positives = 205/324 (63%), Gaps = 22/324 (6%)

Query: 4   VGTPL-LWGGFAVVVVIMLAIDLLLQGRRGAHSMTMRQAAGWSILWVTLSLLFNAAFWWY 62
           VG P+ +W  F   V+ +LA DL +  +   H +T+ ++   S  ++ + LLF A  WWY
Sbjct: 9   VGYPMWVWLMFFGFVLALLAFDLGVLHKE-QHEITVAESLKLSAFYICMGLLFGAWLWWY 67

Query: 63  LVQTEGRAVADPQALAFLTGYLIEKALAVDNVFVWLMLFSYFAVPPALQRRVLVYGVLGA 122
              T G        + +LTGYLIEK+L++DNVFV  ++FS   +P   Q RVL +G++G 
Sbjct: 68  KGSTAG--------MEYLTGYLIEKSLSMDNVFVIALIFSSLGIPRLYQHRVLFWGIMGV 119

Query: 123 IVLRTIMIFAGSWLISQFEWLLYVFGAFLLFTGVKMALAKEDDSGIGDKPLVRWIRNHLR 182
           IVLR IMI  G+ L++Q++ +L +FG FL+FTG+K+  + ++   I D    +W+R+ +R
Sbjct: 120 IVLRAIMIGLGAALVAQYQGVLVLFGLFLIFTGIKVLFSNDEHGDIQDNKFYKWLRSKMR 179

Query: 183 MTDKIEGERFFTRQNGVL-----YATPLLLVLILVELSDVIFAVDSIPAIFAVTTDPFIV 237
            T  +  E+F+ R          +ATPL L LILVE +D++FAVDSIPAIFA+T DPFIV
Sbjct: 180 FTPSLHQEKFWVRGEDHQLSKGWWATPLFLALILVETADLVFAVDSIPAIFAITQDPFIV 239

Query: 238 LTSNLFAILGLRAMYFLLAGVAERFSMLKYGLSVILVFIGIKMLIVDFYH-------IPI 290
            TSN+FAILGLRA+YF LA +  RF  LKY LSV+LVFIG+K+ +V F H       IP 
Sbjct: 240 YTSNIFAILGLRALYFALAAMVHRFEYLKYALSVVLVFIGVKVGLVYFNHEGIVDFKIPT 299

Query: 291 GISLGVVGGILTLTLLINAWVNKQ 314
            +SLGV  G+L   +L + W  ++
Sbjct: 300 ALSLGVTFGLLLAGVLFSLWKTRE 323