Pairwise Alignments

Query, 727 a.a., YgiQ family radical SAM protein from Klebsiella michiganensis M5al

Subject, 680 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  449 bits (1154), Expect = e-130
 Identities = 243/592 (41%), Positives = 341/592 (57%), Gaps = 53/592 (8%)

Query: 29  FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLESQGFRVGIISQPDWNNK 88
           FLPMSR EM  +GWD+ D++L++GDAYVDHP+F  A+ GR L + G+R GI++QP WN  
Sbjct: 17  FLPMSRAEMHAIGWDALDVLLISGDAYVDHPTFAAALLGRWLVAHGYRTGIVAQPRWNTP 76

Query: 89  DDFMRLGKPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTAGNVAGKRPDRATLVYTQRC 148
           +D + +G+P LF G+ AG +DSM+  YTA RK RHDDAYT G  AG RP+RA +VYT   
Sbjct: 77  EDVLCMGRPRLFAGIAAGAIDSMLAHYTAFRKKRHDDAYTPGGKAGARPNRAVIVYTNLL 136

Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208
           ++A+  +PV++GGIEASLRR  HYD+W+D++RRS+L+D+KAD+L++G GE  L E A R 
Sbjct: 137 RQAFAGLPVVIGGIEASLRRATHYDFWTDSLRRSILLDAKADLLVYGMGEYALREAAARY 196

Query: 209 AAGEPIGQIRDVRNTAIMVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKTVA 268
            A    G        A    EAL G  G                                
Sbjct: 197 DAAMNEGG-------AATAAEALHGIGGT------------------------------- 218

Query: 269 PPKQEAKRVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328
                     V      P   + + LPS E +  D  L   A+       + G A A+ Q
Sbjct: 219 --------AWVGTESDMPEGASIMRLPSHEDISADVRLLMEATLQQERHVHRGDAWAI-Q 269

Query: 329 KHGERYIWVNPPAIPLSTEEMDSVFALPYKRVPHPSYGDARIPAYEMIRFSINIMRGCFG 388
             G R + + PPA P+S+E++D ++ALP+ R  HPSY +  +PA +MIR SI   RGC G
Sbjct: 270 PVGSRAVIMAPPAPPMSSEDLDRLYALPFTREAHPSYRET-VPAADMIRTSITTHRGCGG 328

Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGI-ISDLGGPTANMYMLRCKSP 447
           GCSFCS+  H+GR I SRS DS++ E   +        G+ ISD+GGP+ANM+  RC   
Sbjct: 329 GCSFCSLALHQGRRIASRSRDSVLAEARDL--AAAARKGVSISDVGGPSANMWQARCTLN 386

Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507
            A+  CRR SC++P +C     +    + L R  RD  G++ + +ASGVR+D+A+ +   
Sbjct: 387 PAK--CRRASCMFPSVCKGFAVDQRKAVRLLREVRDTPGVRNVRVASGVRFDLALREGEA 444

Query: 508 IKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYF 567
           ++       GG LK+APEH  +  L  M KPG+  +++F E F  +S +AGKEQY++PY 
Sbjct: 445 LRAYTMEFTGGQLKVAPEHICDEVLEYMRKPGLPVFEKFLEAFAAFSDEAGKEQYVVPYL 504

Query: 568 ISAHPGTRDEDMVNLALWLKQHRFRLDQVQNFYPSPLANSTTMYYTGKNPLG 619
           +SA PG  D+ M  L+ WL+   +   QVQ F P+P   +T MY  G +P G
Sbjct: 505 LSAFPGCTDDHMRTLSRWLQARGWSPQQVQCFIPTPGTVATAMYAAGIDPEG 556