Pairwise Alignments

Query, 298 a.a., site-specific tyrosine recombinase XerD from Klebsiella michiganensis M5al

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas stutzeri RCH2

 Score =  345 bits (884), Expect = e-100
 Identities = 179/290 (61%), Positives = 214/290 (73%), Gaps = 1/290 (0%)

Query: 8   IEQFLDALWLERNLAENTLSAYRRDLTMVVEWLHHRGLSLASVSGEDLQSLLAERQTGGY 67
           I+++LDALWLE+ LA+N+  AYR DL +   WL  RG+ LA    E +   LA R   GY
Sbjct: 9   IDRYLDALWLEKGLADNSREAYRSDLALFNGWLSERGVRLAVAGREIILDHLAWRLNNGY 68

Query: 68  KATSTARLLSAVRRFFQHLYREKIRPDDPSALLASPKLPQRLPKDLSEAQVERLLQAPLV 127
           KA STAR LS +R F+++L RE     DP+  +  P+L + LPK LSEA VE LL AP +
Sbjct: 69  KARSTARFLSGLRGFYRYLLREGEIAVDPTLRVDLPRLGRPLPKALSEADVEALLAAPDL 128

Query: 128 EQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVLRVIGKGNKERLVPLGEEAVL 187
             P+ LRD+AMLEVLYA GLRV+EL+ LT+  +S+RQGVLR  GKGNKERLVPLG+EA+ 
Sbjct: 129 GDPIGLRDRAMLEVLYACGLRVTELISLTLEQVSMRQGVLRTFGKGNKERLVPLGDEALH 188

Query: 188 WVENYLEYGRPWLLNGVASDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLR 247
           W+E Y   GR  LL G A DVLFPS R  QMTRQTFWHRIK +A +AGI +  +SPH LR
Sbjct: 189 WLERYQREGRDELLGGKARDVLFPSLRGDQMTRQTFWHRIKLHAKVAGI-ATSISPHTLR 247

Query: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPR 297
           HAFATHLLNHGADLR VQMLLGHSDLSTTQIYTH+A  RL++LH QHHPR
Sbjct: 248 HAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHIARARLQELHAQHHPR 297