Pairwise Alignments

Query, 298 a.a., site-specific tyrosine recombinase XerD from Klebsiella michiganensis M5al

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Pedobacter sp. GW460-11-11-14-LB5

 Score =  193 bits (490), Expect = 5e-54
 Identities = 108/294 (36%), Positives = 184/294 (62%), Gaps = 4/294 (1%)

Query: 8   IEQFLDALWLERNLAENTLSAYRRDLTMVVEWLH--HRGLSLASVSGEDLQSLLAERQTG 65
           I+ F   L LER+L+ N++ AY  D+  ++++    +    L  ++   L+S ++     
Sbjct: 7   IKGFKSYLKLERSLSSNSVDAYLSDIDKLIQFFQSLNEEPKLTDITITHLKSFISWLNDL 66

Query: 66  GYKATSTARLLSAVRRFFQHLYREKIRPDDPSALLASPKLPQRLPKDLSEAQVERLLQAP 125
           G +A++ AR++S ++ FF +L  E++  +DP+ALL +PKL ++LP  L+  ++  L+   
Sbjct: 67  GMQASTQARVISGLKAFFSYLMLEEVISNDPTALLEAPKLSRKLPDTLNIYEINELIAGI 126

Query: 126 LVEQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVLRVIGKGNKERLVPLGEEA 185
              +   +R+KA++EVLY  GLRV+EL  L +S++  +   ++VIGKGNKERLVP+G  A
Sbjct: 127 DASKSEGMRNKAIMEVLYGCGLRVTELTELRISNVFPQIEFIKVIGKGNKERLVPIGSVA 186

Query: 186 VLWVENYLEYGRPWL-LNGVASDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPH 244
           +  ++ Y+   R    +     D +F ++   +++R + ++ IK  A+  G+  + +SPH
Sbjct: 187 LKLLDIYINEVRVHANIKKGHEDFIFLNRFGAKLSRISIFNLIKSLAISTGL-KKTISPH 245

Query: 245 VLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA 298
            LRH+FATHL+  GADLR VQ +LGHS ++TT+IYTH+  + LR++  Q HPRA
Sbjct: 246 TLRHSFATHLIEGGADLRAVQEMLGHSSITTTEIYTHIDRDYLREVITQFHPRA 299