Pairwise Alignments

Query, 298 a.a., site-specific tyrosine recombinase XerD from Klebsiella michiganensis M5al

Subject, 294 a.a., site-specific recombinase, phage integrase family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  213 bits (543), Expect = 3e-60
 Identities = 120/290 (41%), Positives = 170/290 (58%), Gaps = 3/290 (1%)

Query: 8   IEQFLDALWLERNLAENTLSAYRRDLTMVVEWLHHRGLSLASVSGEDLQSLLAERQTGGY 67
           ++++L+ L +ER LAENTL+AY  DL  +  +L  RG  LA V  + L   + + +  G 
Sbjct: 1   MDRWLEHLLVERGLAENTLAAYSADLIELQVFLEERGCLLAEVDEQTLFMHVVDLRRRGM 60

Query: 68  KATSTARLLSAVRRFFQHLYREKIRPDDPSALLASPKLPQRLPKDLSEAQVERLLQAPLV 127
              + AR L+ +R FF     E     DP+  L +PKL + LP  L+  ++  +L  P +
Sbjct: 61  AGRTLARHLATLRGFFAFAVGEGELEADPALFLENPKLARNLPDVLTRDEMATILARPDL 120

Query: 128 EQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVLRVIGKGNKERLVPLGEEAVL 187
              L  RD+ MLE++YA GLRVSEL  L   D   + GV+RV GKG KER+VP+   +  
Sbjct: 121 SDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVRVFGKGAKERIVPVHHVSCA 180

Query: 188 WVENYLEYGRPWLLNGVASDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLR 247
            V  YL   RP          +F ++  + ++RQ  W  +K +   AGI  + +SPH  R
Sbjct: 181 LVTAYLRDWRPAF--SPVEPAMFLNRSGKGLSRQAVWKVVKRHVAEAGIHKD-ISPHTFR 237

Query: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPR 297
           H+FATHLL  GADLR VQ+LLGH+D+S T+IYTHV  +RLR++H  HHPR
Sbjct: 238 HSFATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRLRRIHNAHHPR 287