Pairwise Alignments

Query, 577 a.a., ssDNA exonuclease RecJ from Klebsiella michiganensis M5al

Subject, 574 a.a., single-stranded-DNA-specific exonuclease RecJ from Parabacteroides merdae CL09T00C40

 Score =  261 bits (666), Expect = 7e-74
 Identities = 163/565 (28%), Positives = 298/565 (52%), Gaps = 28/565 (4%)

Query: 22  LPPLLQRLYASRGVRSAQELERGVKGML-----PWSQLTGVEKAVEILYGAFKQGLHIVV 76
           L P++  L   RG+ + +E+++  K  L     P+  +  +EKAV+ L  A      I++
Sbjct: 27  LSPVVCLLLVQRGLTTVEEVKKFFKPSLNDLHDPFL-MPDMEKAVKRLNKALGNKEKILI 85

Query: 77  VGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPEVVDQAHARGAQLIMTV 136
            GD+D DG T+ +L    LR      + Y +P+R+++GYG+S + ++ A   G  L++++
Sbjct: 86  YGDYDVDGTTAVSLVYKYLRPYSSA-LDYYIPDRYDEGYGISYKGINYARENGITLVISL 144

Query: 137 DNGISSHAGVDHAHALGIPVLVTDHHLPGDSLPAAEAIINPNLRDCEFPSKSLAGVGVAF 196
           D GI +   +++A  LGI  ++ DHH+P D+LP A A+++    D  +P + L+G GV F
Sbjct: 145 DCGIKAIEKIEYAKQLGIDFIICDHHMPDDTLPDAVAVLDAKRVDSVYPYEHLSGCGVGF 204

Query: 197 YLMLALRTFLRDKGWFEERGIAPPNLADLLDLVALGTVADVVPLDANNRILTWQGLSRIR 256
             M A         + +       +L  LL+L A+   +D+VP+   NRIL + GL ++ 
Sbjct: 205 KFMQA---------FAKSNNFPFADLEKLLELTAVSIASDIVPITGENRILAYYGLKQLN 255

Query: 257 AGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNTGEAR 316
           +     G+K +++I     +++  SD+ F +GPR+NA+GR+ +    V LLL  +   AR
Sbjct: 256 SNPSL-GLKGIIDICGLSGKEITISDIVFKIGPRINASGRMMNGKEAVELLLAKDVDVAR 314

Query: 317 VLANELDALNQTRKEIEQGMQAEALTLCEKLERSGETLPGGLAMYHPQWHQGVVGILASR 376
             +  ++  N+ R+E+++ +  EA  + ++ +   +     + +Y+P WH+GV+GI+ASR
Sbjct: 315 EKSESINQYNEERRELDKKITDEANAIIDEFQNMEDR--KAIIVYNPGWHKGVIGIVASR 372

Query: 377 IKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYPGLIMKFGGHAMAAGLS 436
           + E+++RP +    + +  + GS RS+ G  +  A+E        L+  FGGH  AAGLS
Sbjct: 373 LTEKYYRPAVVLTKSSE-LITGSARSVTGFDIYKAIESC----RDLLENFGGHTYAAGLS 427

Query: 437 LEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLTAAEMSMEVAQMLRDAGPWGQMFP 496
           L+E   + F QRF +L  + + P  +  ++  D  L   +++ +    L+   P+G    
Sbjct: 428 LKEENLDAFTQRFLKLAADEIIPEQMTPQIDIDAVLDLQDINAKFMSELKKMNPFGPDNQ 487

Query: 497 EPLFD--GRFRLLQQRLVGE--RHLKVMVEPVGGGPLLDGIAFNVDTSLWPDNGVREVQL 552
           +P+F   G       +LVG+   H+K+ +        + GIAF +         ++   +
Sbjct: 488 KPVFCSLGVKDYGTSKLVGKDLEHIKLELIDDKSNTPIHGIAFGMHQHNTHIKNMKPFNI 547

Query: 553 AYKLDINEFRGNRSLQLIIDHLWPN 577
            Y ++ N + GN SLQL++  +  N
Sbjct: 548 CYTIEENTYNGNTSLQLMVKDIKEN 572