Pairwise Alignments

Query, 577 a.a., ssDNA exonuclease RecJ from Klebsiella michiganensis M5al

Subject, 568 a.a., single-stranded DNA exonuclease from Burkholderia phytofirmans PsJN

 Score =  492 bits (1267), Expect = e-143
 Identities = 282/558 (50%), Positives = 357/558 (63%), Gaps = 20/558 (3%)

Query: 22  LPPLLQRLYASRGVRSAQELERGVKGMLPWSQLTGVEKAVEILYGAFKQGLHIVVVGDFD 81
           L P+L RLYASRGV    E+E G+  ++P   L G E+A  +L  A +Q   ++VV D+D
Sbjct: 22  LHPVLARLYASRGVCMPDEIETGLARLVPPVALKGCEEAAALLADAIQQKRRMLVVADYD 81

Query: 82  ADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPEVVDQAHARGAQ----LIMTVD 137
            DGAT+ A++V  LR  G G + YLVPNRFE GYGL+PE+V  A AR A     L++TVD
Sbjct: 82  CDGATACAVAVRGLRMFG-GRIEYLVPNRFEYGYGLTPEIVALA-ARNASGKPDLLITVD 139

Query: 138 NGISSHAGVDHAHALGIPVLVTDHHLPGDSLPAAEAIINPNLRDCEFPSKSLAGVGVAFY 197
           NGI+S  GV+ A+ALGI VLVTDHHLPGD LPAA AI+NPN   C FPSK +AGVGV FY
Sbjct: 140 NGIASVDGVEAANALGIDVLVTDHHLPGDELPAARAIVNPNQPGCTFPSKCIAGVGVMFY 199

Query: 198 LMLALRTFLRDKGWFEERGIAPPNLADLLDLVALGTVADVVPLDANNRILTWQGLSRIRA 257
           ++LALR  LR +G F +     P L  LLDLVALGTVADVV LD NNR+L  QGL RIR 
Sbjct: 200 VLLALRAELRRRGAFND-AFPEPRLDGLLDLVALGTVADVVKLDGNNRVLVAQGLQRIRK 258

Query: 258 GKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNTGEARV 317
           GK +PGI AL   A RD +  +  DLGFALGPRLNAAGRL DMS+G+  L  D+ G A  
Sbjct: 259 GKMQPGIAALFRAAARDARSASGFDLGFALGPRLNAAGRLSDMSLGIECLTTDDIGRAWD 318

Query: 318 LANELDALNQTRKEIEQGMQAEALTLCEKLERSGETLPGGLAMYHPQWHQGVVGILASRI 377
           LA +LD +N+ R+EIE GMQ +AL     +   G T    + +++P WHQGV+GI+A R+
Sbjct: 319 LAQQLDTMNRERREIEAGMQQQALEDLSAINPDGATT---ITLFNPSWHQGVIGIVAGRL 375

Query: 378 KERFHRPVIAFAPTGDG--TLKGSGRSIQGLHMRDALERLDTLYPGLIMKFGGHAMAAGL 435
           KE+FHRP   FA   D   T+KGSGRSI G H+RDAL+ +    PGLI+KFGGHAMAAGL
Sbjct: 376 KEKFHRPSFTFALADDSGQTVKGSGRSISGFHLRDALDLISKREPGLIVKFGGHAMAAGL 435

Query: 436 SLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLTAAEMSMEVAQMLRDAGPWGQMF 495
           +L  A    F   F  +  EWL    L   V +DG L  A  + +  +ML DA  WGQ F
Sbjct: 436 TLAAADVPRFTAAFEAVGREWLSEDALSRTVETDGELEDAYFTPQFVEML-DAAVWGQGF 494

Query: 496 PEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTSLWPDNGVREVQLAYK 555
           P P+F G F +  Q LV ++HLK+ +  V G    + I FN   +L          +AY+
Sbjct: 495 PAPVFSGEFDIASQALVKDKHLKLQL--VRGRQRFNAIWFNHTDTL-----PARTTVAYR 547

Query: 556 LDINEFRGNRSLQLIIDH 573
           L  + + G   +QLI++H
Sbjct: 548 LASDTWNGVSRVQLIVEH 565