Pairwise Alignments

Query, 366 a.a., 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM from Klebsiella michiganensis M5al

Subject, 361 a.a., putative RNA 2'-O-ribose methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  438 bits (1126), Expect = e-127
 Identities = 211/353 (59%), Positives = 266/353 (75%), Gaps = 2/353 (0%)

Query: 1   MNKVVLYCRPGFEKECAAEITDKASRLEVFGFARVKDDSGYVIFECYQAEDGEKLVRELP 60
           M  + LYCR G+EK+CAAEI  +A+ L + GF +   D  YV+F+ +  +DG++L +ELP
Sbjct: 1   MKNLFLYCRAGYEKDCAAEIQQRAAELGIGGFVKANRDDAYVVFQGFSPDDGDRLAKELP 60

Query: 61  FSSLVFARQMFVVGELLRDLPPEDRISPIVGMLQGVVEKGGELRVEVADTNESKELMKFC 120
             SL+FARQMF  G+LL D  PEDR++PI   L  V E+ GELRVE  DTNE+KEL  FC
Sbjct: 61  LDSLIFARQMFACGDLLDDFSPEDRVTPIAESLTEV-ERAGELRVETPDTNEAKELSAFC 119

Query: 121 RKFTVPLRAALREAGVLTNYETPKRPVVHVFFIAPGCCYTGYSLSNNNSPFYMGIPRLKF 180
           RKFTVPLR AL++ GVL + E+ +RP+VHV F+AP   +TGYSLSNN+SP +MGIPRLKF
Sbjct: 120 RKFTVPLRQALKKRGVLLDKESSRRPIVHVCFVAPNKAFTGYSLSNNSSPHFMGIPRLKF 179

Query: 181 PSDAPSRSTLKLEEAFHVFIPADEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVSSVD 240
           P+DAPSRSTLKL+EAF  FIP +E + RL +G+ AVDLGACPGGWTYQLV+R M V ++D
Sbjct: 180 PADAPSRSTLKLDEAFIHFIPREEHETRLRSGLNAVDLGACPGGWTYQLVRRGMMVHAID 239

Query: 241 NGPMAQSLMDTGQVTWLREDGFKYRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRE 300
           NGPM   LM+TGQVT  R DGFK+ P R NI W+VCDMVEKPA+VA LM  W + GW +E
Sbjct: 240 NGPMNHDLMETGQVTHHRADGFKFEPARRNIYWLVCDMVEKPARVAELMEYWAIQGWFKE 299

Query: 301 TIFNLKLPMKKRYEELSRNLAYIQEQLDEHGINA-QIQARQLYHDREEVTVHV 352
            IFNLKLPMK RY+E+S+ LA +   L E+GI+   +  + LYHDR+EVTVH+
Sbjct: 300 AIFNLKLPMKSRYKEVSQILANMHAILKENGIHEFHLACKHLYHDRDEVTVHL 352