Pairwise Alignments

Query, 366 a.a., 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM from Klebsiella michiganensis M5al

Subject, 361 a.a., putative RNA 2'-O-ribose methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score =  443 bits (1139), Expect = e-129
 Identities = 211/353 (59%), Positives = 266/353 (75%), Gaps = 2/353 (0%)

Query: 1   MNKVVLYCRPGFEKECAAEITDKASRLEVFGFARVKDDSGYVIFECYQAEDGEKLVRELP 60
           M  + L+CR G+EKECAAEI  +A+ L V GF +  ++  YV+++C++ + G+ LV++LP
Sbjct: 1   MKNLFLFCRAGYEKECAAEIQQRAAELNVGGFVKANNNDAYVVYQCFEEDGGDTLVKQLP 60

Query: 61  FSSLVFARQMFVVGELLRDLPPEDRISPIVGMLQGVVEKGGELRVEVADTNESKELMKFC 120
             SL+FARQMF   ELL DLP  DR+SPIV  L  V  K GELRVE  DTNE+KEL  FC
Sbjct: 61  LDSLIFARQMFAASELLADLPESDRVSPIVAALSEV-SKAGELRVETPDTNEAKELSAFC 119

Query: 121 RKFTVPLRAALREAGVLTNYETPKRPVVHVFFIAPGCCYTGYSLSNNNSPFYMGIPRLKF 180
           RKFTVPLR  L+++G L   E PKRP++HV FI PG  Y GYS SNN+SP++MGIPRLK 
Sbjct: 120 RKFTVPLRQHLKKSGSLLAQENPKRPIIHVCFIGPGRAYVGYSFSNNSSPYFMGIPRLKM 179

Query: 181 PSDAPSRSTLKLEEAFHVFIPADEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVSSVD 240
            +DAPSRS+LKL+EAF  F+P +E + R+ +GM AVDLGACPGGWTYQLV+R M VS+VD
Sbjct: 180 AADAPSRSSLKLDEAFAQFVPKEEQEVRVRSGMNAVDLGACPGGWTYQLVRRGMMVSAVD 239

Query: 241 NGPMAQSLMDTGQVTWLREDGFKYRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRE 300
           NGPM + LM+TGQV   REDGF++ P R NI W+VCDMVEKPA+VA L+  W +NGW +E
Sbjct: 240 NGPMNEKLMETGQVKHFREDGFRFEPQRKNIYWLVCDMVEKPARVAELIEAWAINGWFKE 299

Query: 301 TIFNLKLPMKKRYEELSRNLAYIQEQLDEHGINA-QIQARQLYHDREEVTVHV 352
            IFNLKLPMK RY+E+   L  +QE L E+GIN  Q+Q + LYHDR+EVTVH+
Sbjct: 300 AIFNLKLPMKSRYKEVMAILNTMQEILKENGINEFQLQCKHLYHDRDEVTVHL 352