Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine synthase TruC from Klebsiella michiganensis M5al

Subject, 273 a.a., pseudouridylate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  243 bits (620), Expect = 3e-69
 Identities = 121/235 (51%), Positives = 154/235 (65%)

Query: 2   LEILYQDQWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVL 61
           +EILY+D  LVA++KP+G LVHRS+L R EK   MQ  RD +G HVF  HRLDRPTSGVL
Sbjct: 23  IEILYEDDDLVAIHKPAGLLVHRSYLARREKYFAMQMTRDLVGCHVFPVHRLDRPTSGVL 82

Query: 62  LMGLSSEAGRLLSQQFEQHQMQKRYHAIARGWLNDEAVLDYPLVEELDKIADKFARENKD 121
           L   SSE    L +QF    +QK Y A+ RG +++  +LDYPL +ELD++ DK    NK 
Sbjct: 83  LFAKSSEMANQLCEQFASKSVQKHYVALVRGNMHEPGLLDYPLKQELDELGDKNVDPNKA 142

Query: 122 PQPAVTHYRGLATVEMAVATGRYPTTRYSLVELEPKTGRKHQLRRHLAHLRHPIIGDSKH 181
            Q A T Y  L   E+   +GRY ++RY+LV+L P TGRKHQLRRH+AHLRHPIIGD+ H
Sbjct: 143 AQEAQTSYHPLLNCEIPYPSGRYASSRYALVQLTPHTGRKHQLRRHMAHLRHPIIGDTTH 202

Query: 182 GDLRQNRSAAEHFGCDRLMLHASQLSLTHPFTGEPLVIRAGLDDVWMRALSQFGW 236
           GD +QNR   EH G +RL L A +L   HP +GE + +   L+  W+      GW
Sbjct: 203 GDGKQNRFMREHSGINRLWLIAKKLEFNHPRSGERIAVETELEAEWLSLFELLGW 257