Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine synthase TruC from Klebsiella michiganensis M5al

Subject, 329 a.a., ribosomal large subunit pseudouridine synthase C (RefSeq) from Shewanella sp. ANA-3

 Score =  106 bits (265), Expect = 6e-28
 Identities = 77/234 (32%), Positives = 118/234 (50%), Gaps = 20/234 (8%)

Query: 4   ILYQDQWLVAVNKPSGWLVHR-SWLDRDEKVVVMQTVRDQIGQHVFT--AHRLDRPTSGV 60
           IL++D  L+ +NKP+G  VH  S +D      V++ +R    Q  F    HRLD+ TSGV
Sbjct: 108 ILHEDNHLIVLNKPAGIAVHGGSGVDYG----VIEALRSLRPQQKFLELVHRLDKDTSGV 163

Query: 61  LLMGLSSEAGRLLSQQFEQHQMQKRYHAIARG-WLNDEAVLDYPLVEELDKIADKFAREN 119
           LL+     A + +  Q    +MQK Y A+ +G W   + V+  PL++   K  ++  R N
Sbjct: 164 LLVAKKRSALKHMHDQLRYKKMQKDYLALVKGEWSAQDKVVKQPLLKLTLKSGERIVRVN 223

Query: 120 KDPQPAVTHYRGLATVEMAVATGRYPTTRYSLVELEPKTGRKHQLRRHLAHLRHPIIGDS 179
            + +P+ T ++            RY     +LV+  P TGR HQ+R H  ++ HPI  D 
Sbjct: 224 AEGKPSETRFK---------IVQRYQGC--TLVQASPVTGRTHQIRVHCQYMGHPIACDE 272

Query: 180 KHGDLRQNRSAAEHFGCDRLMLHASQLSLTHPFTGEPLVIRAGLDDVWMRALSQ 233
           K+ +   + S     G  RL LHA++L   HP   E + + A LDD   + LS+
Sbjct: 273 KYSEQAFDDS-MRALGLTRLFLHAAELMFIHPENDEVMRVSAPLDDNLQQLLSK 325