Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine synthase TruC from Klebsiella michiganensis M5al

Subject, 225 a.a., ribosomal large subunit pseudouridine synthase A (RefSeq) from Shewanella sp. ANA-3

 Score =  110 bits (275), Expect = 3e-29
 Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 21/221 (9%)

Query: 2   LEILYQDQWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVL 61
           L++LYQD+ ++ VNKPSG L+     D      V   V+ +   H    HRLD  TSGV+
Sbjct: 14  LDVLYQDKDIIVVNKPSG-LLSVPGRDPAHYDSVYARVKAE-HPHCQIVHRLDMATSGVI 71

Query: 62  LMGLSSEAGRLLSQQFEQHQMQKRYHAIARGWL-NDEAVLDYPLVEELDKIADKFARENK 120
           ++ L   A R L +QF   +  K Y A   G + N    +DYPL+ +      K   +++
Sbjct: 72  VVALIRSAERELKRQFHDRETSKTYLARVAGHVKNTTGSVDYPLICDWPN-RPKQKVDHE 130

Query: 121 DPQPAVTHYRGLATVEMAVATGRYPTTRYSLVELEPKTGRKHQLRRHLAHLRHPIIGDSK 180
             +P++TH+  L+  +           R +LV+L+P TGR HQLR H+  L HPI+GD  
Sbjct: 131 IGKPSLTHFEVLSRAK-----------RSTLVKLKPITGRSHQLRVHMMALGHPILGDGF 179

Query: 181 HGDLRQNRSAAEHFGCDRLMLHASQLSLTHPFTGEPLVIRA 221
           + D      A       RL+LHA++L++ HP+TGE +   A
Sbjct: 180 YADPLAKSLA------PRLLLHAAELTIKHPYTGESMTFSA 214