Pairwise Alignments

Query, 352 a.a., recombinase RecA from Klebsiella michiganensis M5al

Subject, 351 a.a., protein RecA from Herbaspirillum seropedicae SmR1

 Score =  466 bits (1200), Expect = e-136
 Identities = 239/349 (68%), Positives = 290/349 (83%), Gaps = 7/349 (2%)

Query: 2   AIDENKQKALAAALGQIEKQFGKGSIMRLGEDR-SMDVETISTGSLSLDIALGAGGLPMG 60
           A +  K KALAAAL QIEKQFGKGS+MR+ +   + +++ +STGSL LDIALG GGLP G
Sbjct: 7   ANNSEKSKALAAALAQIEKQFGKGSVMRMEDGVIAEEIQAVSTGSLGLDIALGIGGLPRG 66

Query: 61  RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQP 120
           R++EIYGPESSGKTTLTLQ IA  Q+ G TCAFIDAEHALD  YA+KLGV++++LL SQP
Sbjct: 67  RVIEIYGPESSGKTTLTLQSIAEMQKLGGTCAFIDAEHALDVTYAQKLGVNLNDLLISQP 126

Query: 121 DTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180
           DTGEQALEICDAL RSGAVD+IVVDSVAALTPKAEIEG++GDS  GL AR+MSQA+RKL 
Sbjct: 127 DTGEQALEICDALVRSGAVDLIVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQALRKLT 186

Query: 181 GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG 240
           G++ ++NT +IFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRR G++K GD V+G
Sbjct: 187 GSINRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKSGDEVIG 246

Query: 241 SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYSGDKIG 300
           SET+VKVVKNK+A PF++A F ILYGEG +  GE++DLG + K++EK+GAWYSY+G++IG
Sbjct: 247 SETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSEHKVVEKSGAWYSYNGERIG 306

Query: 301 QGKANAISWLKENPAAAKEIEKKVRELLLSNQDATPDFAVDGNSEAETE 349
           QGK NA ++LKE+P  A+EIE KVR  L       P+ A  G +EAE +
Sbjct: 307 QGKDNARNYLKEHPELAREIENKVRVAL-----GVPELA-GGEAEAEAK 349