Pairwise Alignments

Query, 594 a.a., ATPase AAA from Klebsiella michiganensis M5al

Subject, 617 a.a., sigma-54-dependent Fis family transcriptional regulator from Pseudomonas sp. BP01

 Score =  312 bits (799), Expect = 3e-89
 Identities = 219/597 (36%), Positives = 300/597 (50%), Gaps = 36/597 (6%)

Query: 10  PEIEASPLLSDSWCRSQR-YGLDPATDDFPRLHASELAERLASHSRL-QTLAQPVVNALS 67
           P+     L+ DSW RS   Y LDP +   PR+ +  L       + L   +A   V  L 
Sbjct: 24  PQAPVPALILDSWRRSMELYRLDPGSQQGPRILSQSLLNECRERAELFLRIASDAVARLH 83

Query: 68  RKVNDLQSVVVLSDASGLVLQTFGDTHAMQKAQRFALAPGNLWSESGRGTNAIGTALAID 127
            +V      V+L+DA G  +    ++      ++  L  G  WSE   GT  +   L   
Sbjct: 84  ERVRGADYCVLLTDAQGRTIDYRVESAIRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTSK 143

Query: 128 DSCEIDGRQHFLTSNRGLYCAAVPLQSPDGNIAGVLDISGPAHYPHARTL----SWVKGA 183
               +  R HF  +  GL C A P+  P G + GV+D+S        R+       V+  
Sbjct: 144 APVTVHKRDHFRAAFIGLTCTAAPVFDPQGELLGVVDVSALQSPDDRRSQHLIRQLVEQT 203

Query: 184 AKQIEYLWFKQSLHPQQWLMSLHPQPEKLDGVDELLLVF-TDAVLTAANRLAMREFSLNA 242
           A++IE  +F  S     W+M  H  P  ++   + LL +  D  L A N LA R    + 
Sbjct: 204 AREIENAFFMHSAQGH-WVMRAHGTPGYVESQPDYLLAWDADGRLQAINSLARRRLVQHL 262

Query: 243 ----EQFGHLTFQQLFPRLRQTAVSIPLPLAAGDRHYYYRLRAPATASVAVTPRPGIDLL 298
               E  G L F     R   T+ +  LP   G    Y R+ AP         R  +  L
Sbjct: 263 GRLPEHIGEL-FDMGQLRRVNTSSAQRLPGLGG---LYGRVSAPQQ-------RQRVQPL 311

Query: 299 FSSQREG-EKLLRLL----NAGIGLCIEGETGCGKEYVSRTLHRHSRWSGGKFVAINCAA 353
             +Q    E+ LRL     +  + + ++GETG GKE  +R +H+ S+   G FV +NCAA
Sbjct: 312 HQAQDARIEQHLRLATRVKDCNLAVLVQGETGVGKEVFARQIHQQSQRRDGPFVTLNCAA 371

Query: 354 IPESLIESELFGYQPGAFTGANKNGYIGKIREADGGVLFLDEIGDMPLTLQTRLLRILQE 413
           IPE+LIESELFGY  GAFTGA+  G  G +++ADGG LFLDEIGDMPL LQTRLLR+L E
Sbjct: 372 IPENLIESELFGYVAGAFTGASSKGMQGLLQQADGGTLFLDEIGDMPLNLQTRLLRVLAE 431

Query: 414 KEVTPLGASRSSPVNFAVICATHRNLAQRVAEGTFREDLLYRLREFALTLPPLREWPELP 473
            EV PLGA+R   V+  VICATHR+L   V +G FREDL +RL      LPPLRE  +  
Sbjct: 432 GEVAPLGAARRERVDIQVICATHRDLVAMVKDGRFREDLYFRLANARFELPPLREREDRL 491

Query: 474 AFIQRLWRDLGGEKR----RVALGPALVQHLATQPWPGNVRQLQSLMRVLLALAEEGETL 529
             I +L   L  E +     V L    +Q L    WPGN+RQL+ ++R   A++E G+ +
Sbjct: 492 GLIHQL---LAEEAQACGVEVVLADDALQALLVYRWPGNLRQLRQVLRYACAVSEGGQ-V 547

Query: 530 AVGDLPQEYRSSPAPRPPRGLQQHDAQLIADTLASYNGNISKAAQALGVARSTLYRR 586
            + DLPQE R         G+     QL+ D L  +    + AA+ALG++R+TLYRR
Sbjct: 548 QLQDLPQEVRGEAVVSSDSGVSCPARQLLLDALIRHRWKPADAARALGISRATLYRR 604