Pairwise Alignments

Query, 594 a.a., ATPase AAA from Klebsiella michiganensis M5al

Subject, 626 a.a., sigma-54 dependent transcriptional regulator from Marinobacter adhaerens HP15

 Score =  305 bits (780), Expect = 5e-87
 Identities = 211/622 (33%), Positives = 322/622 (51%), Gaps = 52/622 (8%)

Query: 17  LLSDSWCRSQRYGLDPATDDFP-RLHASELAERLASHSRLQTLAQPVVNALSRKV-NDLQ 74
           +++DSW R   +GLD   +  P +   + L E    HS L ++ +  V    R V ++ +
Sbjct: 12  VIADSWNRCIAWGLDHDHEPAPLKPEPARLEEINRQHSELLSVTEAEVLPYYRNVLSNSR 71

Query: 75  SVVVLSDASGLVLQTFGDTHAMQKAQRFALAPGNLWSESGRGTNAIGTALAIDDSCEIDG 134
            +++L+D    VL ++GD    +   +     G  W E   GTNAIGT++A+    +I  
Sbjct: 72  CLILLADQHATVLSSWGDERITETRLKPWFQTGANWQEQNCGTNAIGTSIAVGGPVQIQR 131

Query: 135 RQHFLTSNRGLYCAAVPLQSPDGNIAGVLDISGPAHYPHARTLSWVKGAAKQIEYLWFKQ 194
            +HFL +NR +  +A P+      IAGVL +   A+ P A TL  V+  ++ +E     +
Sbjct: 132 NEHFLKTNRSIIGSAAPIFDAHRQIAGVLSVFSDAYLPQAHTLGMVRLLSQSVENRLINR 191

Query: 195 SLHPQQWLMSLHPQPEKLDGVDELLLVFTDA-VLTAANRLAMREFSLNAEQFGHLTFQQL 253
              P  + ++L+   +  D     +LV  D+  + A+N+ A +   +N  +       +L
Sbjct: 192 QFGPDHFQITLNTTADNFDSPWSGILVCDDSGQVIASNQRADQLLGMNTVE---ARLDEL 248

Query: 254 FPRLRQTAVSIP----LPLAAGDR-HYYYRLRAPAT---ASVAVTPRPGIDLLFSSQRE- 304
           F R R   +  P    L L    +     R++ P     A+    P P  + L  S R  
Sbjct: 249 FTRHRNHILGHPETETLQLTTRSKVRLSARIKRPTRIPDANGKTKPSPVPEDLRQSARPL 308

Query: 305 ---------------GEKLLRLLNAGIGLCIEGETGCGKEYVSRTLHRHSRWSGGKFVAI 349
                            + L++L  G+ + I GETG GKE + + LHR S       VA+
Sbjct: 309 DIDNLDYGDSAVKRCATQSLKVLERGLPVLITGETGVGKEVLVKALHRASHRKDQPLVAV 368

Query: 350 NCAAIPESLIESELFGYQPGAFTGANKNGYIGKIREADGGVLFLDEIGDMPLTLQTRLLR 409
           NCAAIP  L+ESELFGY+ GAFTGA   G +G IR+A  GVLFLDEIG+MPL+ Q+RLLR
Sbjct: 369 NCAAIPPELVESELFGYEAGAFTGARAQGSLGFIRKAHKGVLFLDEIGEMPLSAQSRLLR 428

Query: 410 ILQEKEVTPLGASRSSPVNFAVICATHRNLAQRVAEGTFREDLLYRLREFALTLPPLREW 469
           +LQE+ VTP+G++ S PV+  ++ AT+R L  R+  G FR DL YR+    + LP LR  
Sbjct: 429 VLQERVVTPVGSTDSVPVDILLVTATNRPLTTRIENGHFRADLYYRINGLCVELPALRNR 488

Query: 470 PELPAFIQRLW---RDLGGEKRRVALGPALVQHLATQPWPGNVRQLQSLMRVLLALAEEG 526
            +    IQ L+   RD G  ++   L P ++  L   PWPGN+RQL +++RV +A+A +G
Sbjct: 489 ADRRMLIQSLYARHRDPGQSEQ---LSPKVLSALEAHPWPGNIRQLVNVLRVAIAIA-DG 544

Query: 527 ETLAVGDLPQ----EYRSSP--------APRPPRGLQQHDAQLIADTLASY---NGNISK 571
           E + V  LP+    E+ ++P          +P  G +      +A TL  Y    GNIS+
Sbjct: 545 EQVQVWHLPEDFLAEFEANPLEQSDPPMQEQPVAGSEAETEDTLARTLQIYRKCTGNISQ 604

Query: 572 AAQALGVARSTLYRRAARRGSR 593
           AA+ L ++R+TLY+R    G R
Sbjct: 605 AARELSISRNTLYKRLREMGVR 626