Pairwise Alignments

Query, 456 a.a., membrane protein from Klebsiella michiganensis M5al

Subject, 362 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 50.8 bits (120), Expect = 7e-11
 Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 21/224 (9%)

Query: 7   RAAWLNLLRRLHFYIGLFIGPFIFAAALTGTLYVATPQLESWLYQNALRGTL--SGEKQP 64
           R  +  ++  LH ++GL  G  +F   LTG +Y  + +L++ LY + L   +    +KQ 
Sbjct: 3   RTGFKKIIYLLHLWLGLSSGLVVFVIGLTGAIYSFSDELKAVLYHDRLYVDIPHGAKKQS 62

Query: 65  LSAQITVATEAIQGNLRLHAVRPGILAGDTTRVMFIDPNLGESETRAIFVDPVTLSVKGD 124
               + VA +   G  ++  V    +     R         E     ++++P T  +   
Sbjct: 63  FDQLLFVAQKKFGGLKKISRVE---IQQSPDRTYMFRAYKAEKYFEKVYLNPYTAQI--- 116

Query: 125 LPVYGTSGILPLRQWIDYAHRSLLLGS-VGRLYSELAASWMWVAALGGIAL-----WSMT 178
             V+           +   HR+LLLG  VG      +     +  L GI L     W + 
Sbjct: 117 --VFHEDANKEFFNVVLSIHRTLLLGDVVGHFIIRWSVVCFVILLLSGIVLWWPKKWKIN 174

Query: 179 RPRRRINNKMQNSRR-----LHVSLGWALLVGMLIFSATGLTWS 217
             ++++  K     +     LH   G+   + +LI S TGL WS
Sbjct: 175 FWKQKLQVKWDAKAKRLNYDLHQVFGFYAFLILLIISLTGLMWS 218