Pairwise Alignments

Query, 585 a.a., ATP-dependent helicase from Klebsiella michiganensis M5al

Subject, 590 a.a., DNA damage response helicase (yejH or radD) (from data) from Shewanella oneidensis MR-1

 Score =  627 bits (1616), Expect = 0.0
 Identities = 318/583 (54%), Positives = 403/583 (69%), Gaps = 9/583 (1%)

Query: 5   LRPYQKEAVDATLAWFRRHHEPAAIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVAQ 64
           LR YQ++AVDA +  F++  + A +VLPTGAGKS+VIAELAR+ARGRVLVL HVKELVAQ
Sbjct: 11  LRDYQQQAVDAAIVHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLVLTHVKELVAQ 70

Query: 65  NHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDQFQGEFSLLIVDECHRISD 124
           N  K   L  EA I++AGL +K S GK V  S+QS AR L QF   FSL+I+DECHR+S 
Sbjct: 71  NAQKVGLLTTEASIYSAGLNKKSSVGKTVVASIQSAARALGQFNEPFSLVIIDECHRVSL 130

Query: 125 DDDSQYQQIISHLQQVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDENALFRDCIYE 184
           +  SQYQQ++SHLQQ NP L+LLGLTATP+RLG GWIY+ HYHG V   E  +F  CI+E
Sbjct: 131 EKTSQYQQLLSHLQQRNPQLKLLGLTATPYRLGTGWIYKRHYHGKVGSPELGIFEQCIFE 190

Query: 185 LPLRYMIKNGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNHELKKQQRVTPHIVSQ 244
           LP+R +IK GYLT P   D    QYDFS+++A  NG + EA +N  L    R T  IV Q
Sbjct: 191 LPIRPLIKQGYLTAPTLFDGLSAQYDFSQIKANKNGEYPEAQVNDLLNHAGRATTAIVKQ 250

Query: 245 IVEFAQTRKGVMIFAATVEHAREVTGLL---PQGEAALITGETPGPERDRIIEAFKAQQY 301
           ++E +  R+G++IFAATV HA E+   L    + + A++T +TP  ERD +IE FKA++ 
Sbjct: 251 LIELSHHRQGIIIFAATVRHAEEIVSQLNKEHREQTAIVTAQTPDNERDELIERFKAREL 310

Query: 302 RYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPH 361
           ++LVNVAVLTTGFDAPHVDLIAILRPT SVSL+QQ++GRGLR+  GK DCL++DYA N +
Sbjct: 311 KFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRICEGKKDCLVIDYAANGY 370

Query: 362 DLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDEGH 421
           DLY PEVG  K  S +VPVQV CP C FAN FWG T  DG +IEHFGRRCQG  E   G 
Sbjct: 371 DLYFPEVGQAKPNSKSVPVQVHCPVCQFANIFWGLTDDDGDIIEHFGRRCQGIVE-HHGK 429

Query: 422 REQCDFRFRFKNCPQCNAENDIAARRCRECDTILVDPDDMLKAALKLKDALVLRCSGMDL 481
           ++QCDFRFR K+CP C  ENDIAAR C+ C + L+DPD  LK  L  +   + RC  M L
Sbjct: 430 KQQCDFRFRAKSCPDCGQENDIAARICQHCQSTLIDPDKRLKQVLNKQHHHLFRCQHMTL 489

Query: 482 QHGADDKGSWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGV-PLRWITP 540
              A D    LK+ Y D DG + +  F+L TPAQ  A   LFI PH+RTPG+ P ++   
Sbjct: 490 MDDAGD----LKVQYLDIDGNEFNRHFKLQTPAQWRALYALFIFPHSRTPGLKPKQYKQV 545

Query: 541 ADIIAQQALLRHPDFVVARMKGQYWQVREKVFDYQGRFRRANE 583
           +++IA  A  + PD ++ +   + W + E  FDYQGR++  N+
Sbjct: 546 SELIADSATFKMPDLLLLKKHKKGWDLLESYFDYQGRYQTENK 588