Pairwise Alignments

Query, 1016 a.a., formate dehydrogenase-N subunit alpha from Klebsiella michiganensis M5al

Subject, 1004 a.a., selenium-containing formate dehydrogenase, nitrate inducible, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1249 bits (3231), Expect = 0.0
 Identities = 592/1015 (58%), Positives = 752/1015 (74%), Gaps = 14/1015 (1%)

Query: 3    LSRRQFFRICAGGMAGTTVASLGFLPSFSAHAETRQYKLLKAKETRNNCTYCSVGCGILM 62
            ++RRQFF++CA G A + +++LG + S  A+A  R++KLL AKETRNNC YCSVGCG+LM
Sbjct: 1    MNRRQFFKLCAAGAATSAISALGLM-SEKAYAAVREFKLLGAKETRNNCPYCSVGCGLLM 59

Query: 63   YSFGDNAKNVRERIYHVEGDPDHPVSRGSLCPKGAGVLDYIHSDNRLRYPEYRAPGSDKW 122
            YS G   KN    I+H+EGD DHPV+RG+LC KGAG++DY++S +RL+YPEYRAPGS+KW
Sbjct: 60   YSQGSGGKNSEHAIFHIEGDADHPVNRGALCSKGAGLVDYVNSPHRLQYPEYRAPGSNKW 119

Query: 123  TRMSWDEAIDRIARLMKDDRDANFIEKNALGVTVNRWTSTSMLCSSAASNETGILDGKFT 182
             R+SW +A  RIARLMKDDRDAN IEKNA GVTVNRW +T M+ SS  +NE+G+   KF 
Sbjct: 120  ERISWQDAFKRIARLMKDDRDANLIEKNADGVTVNRWLTTGMMTSSGMANESGLATQKFA 179

Query: 183  RALGMVSIDCQARLCHGPTVSALAPTFGRGAMTNNWVDIKNANVVLIMGGNAAEAHPVGF 242
            RALG+V+ID  AR  H PTV++LAPTFGRGAMTN+W+DIKN+NVV+IMGGNAAEAHPVGF
Sbjct: 180  RALGLVAIDTIARNUHSPTVASLAPTFGRGAMTNHWIDIKNSNVVIIMGGNAAEAHPVGF 239

Query: 243  KWVIEAKIKNNATVIVVDPRFNRSAAVADLYAPIRAGSDSAFLLGAIRYLIEHDRIQHEY 302
             WV EA   NNA +IVVDPRFNRSA++AD YAPIR+G+D AFLLG IRYLI  +++  +Y
Sbjct: 240  GWVTEAMQHNNAKLIVVDPRFNRSASLADHYAPIRSGTDIAFLLGVIRYLISTNQVNFDY 299

Query: 303  VRHYTNASMIVREDYDFDEGLFSGFDPQKRQYDKTSWNYELDANGLARRDDTWNHPRCVW 362
            V+ YTNAS +VR+D+DF +GLFSGFD  K +Y+K SW Y+LD +G A  D+T  HPRCVW
Sbjct: 300  VKAYTNASYLVRDDFDFHDGLFSGFDEAKGEYNKESWFYQLDEDGYAIVDETLEHPRCVW 359

Query: 363  NLLKQHVERYTPELVNRLCGTSLHDFQRICELLASTSAANRTATILYALGWTHHTTGAQT 422
            NLLKQHVERY    V+ + GT   D+Q +C+ +AST   +R AT +YALGWTHH+ GAQ 
Sbjct: 360  NLLKQHVERYDFATVSNITGTPTEDYQVVCDAIASTHTKDRVATFMYALGWTHHSKGAQN 419

Query: 423  IRAAAMLQLLLGNIGMAGGGVNALRGHSNIQGYTDLGLLSTNLPGYMPLPSEKQVDYQSY 482
            IR+ AM+QLLLGNIG  GGGVNALRGH+N+QG TD+GLL+ +LPGY+ LP++K+    ++
Sbjct: 420  IRSMAMIQLLLGNIGQLGGGVNALRGHANVQGSTDMGLLAQSLPGYLKLPNDKEPTLAAH 479

Query: 483  ISQITPAALGVNEVNYWQNTPKFFVSMMKSFWGDAATAENSWGYDWLPKWDRLYDVMTQA 542
            ++  TP  L   + NYWQN PKF+VS++K+FWG+ AT EN +GY WLPKWD++YD     
Sbjct: 480  LAANTPKPLRPGQTNYWQNYPKFYVSLLKAFWGENATPENEFGYQWLPKWDQMYDFGKHL 539

Query: 543  ELMAQGKINGYVVQGFNPLAAFPDKNKSARALAKLKYLVVIDPLVTESSNFWQNHGEMND 602
            ++M +GK+NG +VQG N + + P++NK+ +AL+ LK+LVV+D L +E++ FWQN    N+
Sbjct: 540  DMMYRGKVNGCIVQGVNAINSMPNRNKNIKALSNLKFLVVLDNLSSETATFWQNEPGFNE 599

Query: 603  VRPADIQTEVFRLPSSCFAEENGSIANSGRWLQWHWAAAEPPGEALHDGKILGRLFMRLR 662
            V  A IQTEVFRLP++ FAEE GSI NSGRW+QWH+  A PPGEA+ D +I+  L + LR
Sbjct: 600  VDTASIQTEVFRLPATVFAEEEGSIVNSGRWMQWHYKWANPPGEAMSDSEIVSGLLLELR 659

Query: 663  DLYRQEGGANPAPVLNMSWDYHDPLDPQPEEVAREANGKALRDIVDEQGRVVVKKGQQLS 722
             LYR+EGG  P P+  ++W+Y DP +P   E+ +E NG              V   +Q+S
Sbjct: 660  KLYREEGGKLPEPIQAINWNYTDPHNPSSIELTKELNG------------YDVATKRQIS 707

Query: 723  SFAQLKDDGSTSSYCWVYCGCWTEQGNQMANRDNSDPYGLGCTPGWAWSWPANRRILYNR 782
            SFA+LK DGST+S CWVY G WTE GNQMA RDN DP G G TPGWA++WP NRR+LYNR
Sbjct: 708  SFAELKADGSTASACWVYAGSWTEAGNQMARRDNHDPSGKGITPGWAFAWPLNRRVLYNR 767

Query: 783  ASADPAGKPWDPQRSLLNWDGKRWTGMDVADY-SQAAPNTNVGPFIMNPEGVARLFSLDK 841
            AS D  GKPWD  R ++ W   +W G+DV D+ ++  P  +  PFIM  +GV R F+L  
Sbjct: 768  ASCDVNGKPWDEHRKIVEWKDGKWEGIDVPDFNAKLNPQESAHPFIMQADGVGRFFALKL 827

Query: 842  LNDGPFPEHYEPVESPIGTNPLHPKVVSSPVARIYHDDLANMGKADEFPYVATTYSITEL 901
            L +GPFPEHYEPVESPIGTNPLHP VV SPV R +      +G  +E+PY  TTYS+TE 
Sbjct: 828  LKEGPFPEHYEPVESPIGTNPLHPNVVHSPVLRWFEGVKDTIGTKEEYPYACTTYSLTEH 887

Query: 902  FRHWTKHARLNAIVQPEQFVEIGEALAKEKGIVAGDTVKVMSKRGFIKAKAVVTKRIQAL 961
            F  WT H RL AI  PE FVE+ E LA EKGI  GD VKV SKRG I  KA+VTKR++ L
Sbjct: 888  FNFWTTHCRLAAIAMPETFVEMNEQLAAEKGIKNGDWVKVSSKRGHILTKALVTKRMRPL 947

Query: 962  TIDGRTVNTIGIPCHWGFEGATRKGFLANTLTPSVGDANSQTPEYKAFLVNVEKA 1016
             ++G+TV+T+GIP H      TRK +  N LT  +GDAN+  PEYKAFLVNVEKA
Sbjct: 948  QVNGQTVHTLGIPRHGSHNALTRKSYSCNVLTTEMGDANTGVPEYKAFLVNVEKA 1002