Pairwise Alignments

Query, 352 a.a., FUSC family protein from Klebsiella michiganensis M5al

Subject, 374 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  106 bits (264), Expect = 1e-27
 Identities = 66/244 (27%), Positives = 128/244 (52%), Gaps = 20/244 (8%)

Query: 9   PFEIRLYRHYRIVHGVRIALAFVLTFVLVRLLNVPEGTWPLITLVVVMGPISFWGNVVPR 68
           PF   +YRH+R +H +++ LA ++  ++  + + P   W ++T+V++M  +   G  + +
Sbjct: 9   PFADFIYRHFRAIHALKLGLALLIAVIINAIWSPPHFIWSMVTIVIIMMSLPQVGGAIEK 68

Query: 69  AFERIGGTILGSALGLVALKLELISLPIMLLWCAVAMFLCGWLALGKKPYQALLIGITLA 128
           + +R  GT LGSA G V L   + S  +++    + + L  +++ G+  Y  L+ G T+ 
Sbjct: 69  SLQRAVGTCLGSAYG-VMLVATIDSYWLIMGLLILGVTLICFISAGRYSYAYLVAGFTII 127

Query: 129 VVVGAPPGDMTTALWRSGDVIFGSLLAMLFT-GIWPQRAFLHWRIQMASYVTAFNRLYQA 187
           +VVG    D + ALWR+ +++ G ++A+L +  I+P +A   WR Q+A+ + +  ++   
Sbjct: 128 IVVGDASHDTSEALWRTANILLGCVIAILVSLFIFPIKAKHDWRSQLANAINSMAKV--- 184

Query: 188 GFSPNLVERPRLEKHLQKVLNDVVKMRGLITPASKETHIQKAIFEAI----QTVSRNLVC 243
                      L +HLQ   N  +  R  +  A K    QK +F ++    QT+ ++ V 
Sbjct: 185 -----------LTQHLQAPANHDLDFRADLEAAMKAVLTQKKLFFSLEWESQTLKKHKVL 233

Query: 244 MLEL 247
           + EL
Sbjct: 234 LAEL 237



 Score = 25.0 bits (53), Expect = 0.003
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 216 LITPASKETHIQKAIFEAIQTVSRNLVCMLELQINAYWASRPGHFV 261
           +  PAS         F AI  +   L  ++ + INA W+  P HF+
Sbjct: 3   VFAPASPFADFIYRHFRAIHALKLGLALLIAVIINAIWS--PPHFI 46