Pairwise Alignments

Query, 686 a.a., oligopeptidase B from Klebsiella michiganensis M5al

Subject, 730 a.a., protease II PtrB from Caulobacter crescentus NA1000

 Score =  454 bits (1169), Expect = e-132
 Identities = 254/686 (37%), Positives = 382/686 (55%), Gaps = 19/686 (2%)

Query: 2   PPKAKRIPHAMTLHGDTRIDNYYWLRDDDRSQ---------PEVLDYLRQENEYGKKVMS 52
           PP AK++P  +T  G TR D+Y W++DD+  +          +V ++L  EN Y K +++
Sbjct: 40  PPVAKKVPKTITQLGRTRTDDYAWMKDDNWQKVLRDPSLIKADVKEHLTAENAYTKAMLA 99

Query: 53  SQSSLQDRVLKEIIDRIPQREVSAPYSKNGYRYRQVYEPGCEYAIYQRQPVVKEEWDEWD 112
              +LQ  + +E+  RI Q + S P     + Y   Y+ G ++ ++ R+PV        +
Sbjct: 100 PTEALQAAMFEEMKGRIKQDDASVPAKDGPFEYYTRYDKGAQHPVHARKPV---GGGAEE 156

Query: 113 VLLDGNQRAAGSEFYTLGGLGVSPDNSLMAVAEDYLSRRQYSLRFFPLNDDRQFAEVLEN 172
           VLLD  + A G  FY +G    SPD+ L A A D      + +    L       E +++
Sbjct: 157 VLLDEEKEAKGKAFYQVGAASHSPDHKLYAWAVDEQGSEVFRIHVKDLATGALLGEAVDS 216

Query: 173 VSPDFAWSNDSQTLWYVRKHPTTLLPYQVWRHRLGTPASADVLVYEEQDDTFYVSVHKTT 232
            + DF +S D Q L++  +      P +++R  +   A  DVL+Y+E D+ F++ V  ++
Sbjct: 217 TTGDFCFSPDGQWLFWTFRDDNGR-PAKIYRRPIKGAAKDDVLIYDEPDEGFFIGVGVSS 275

Query: 233 SQQFVVIYLASATTSEVLLLNAEMTDAEPVCFLPRRKDHEYSLDHYQHAFYLRSNREGK- 291
           S+++VVI   +  TSE LL+ A    A+PV F PR     Y ++H+   + +R+N +G  
Sbjct: 276 SEKYVVISCGNQETSEALLIPAANPTAKPVVFHPREVGLRYEVEHWNDHWVIRTNADGAV 335

Query: 292 --NFGLYRSTLRDEQQWETLIAPRHEVMLEGFTLFTDWLVVEERQRGLTSLRQINRKTRE 349
                    T   +  W+  +A +   ++ G   +  W V  E+   L  +  +  +   
Sbjct: 336 DWKLVTTPETATGKANWKDWVAHKPGRLISGTMAYKAWFVRLEKVDALNRV-VVTAQDGA 394

Query: 350 SQGIAFDDPAYVTWLAYNPEPETSRLRYGYSSMTTPDTLFELDMNTGERRVLKQQEV-KG 408
              IAFD+ AY   L    E +T  +R+ Y+SMTTP   F+ DM + +R + K QE+  G
Sbjct: 395 EHAIAFDEAAYALSLEGGYEYDTDTVRFVYNSMTTPRQWFDYDMKSRQRTLRKTQEIPSG 454

Query: 409 FDASHYRSEHLWIIARDGVEVPVSLVYRDEHFRKGASPLLVYGYGSYGASMDADFSASRL 468
            D S Y +  L   A DG EVP+ ++ +      G++PLL+YGYGSYG SM+ +FS    
Sbjct: 455 HDPSKYETRRLNAKAADGAEVPIFVLMKKGTKLDGSAPLLLYGYGSYGISMEPNFSIRNF 514

Query: 469 SLLDRGFVFAIAHIRGGGELGQQWYEDGKFLCKKNTFNDYLDVCDALLAQGYGDPRFCYG 528
           SL+DRG+++A A  RGG E G  W+ DGK   KKNTF D++   + L A GYG P     
Sbjct: 515 SLVDRGWIWATACPRGGSEKGWSWFLDGKKFKKKNTFTDFIACAEHLHAAGYGKPASTVA 574

Query: 529 MGGSAGGMLMGVAVNQRPELFHGVVAQVPFVDVLTTMLDESIPLTTGEFEEWGNP-QDED 587
            GGSAGG+LMG   N RP+LF G++A VPFVDV+ TM D ++PLT  E+ EWGNP +D++
Sbjct: 575 YGGSAGGLLMGAITNMRPDLFAGIIAAVPFVDVVNTMSDTTLPLTPPEWPEWGNPLEDKE 634

Query: 588 YYRYMKSYSPYDGVQAQTYPHLLVTTGLHDSQVQYWEPAKWVAKLRALKTDDNLLLLCTD 647
            Y Y+ SYSPYD +  + YP +L T GL D +V YWEP KWVAKLR   T  N +LL  +
Sbjct: 635 AYDYIASYSPYDNIGPKPYPAILATGGLSDPRVTYWEPQKWVAKLRPATTSGNPVLLKIN 694

Query: 648 MDSGHGGKSGRFKSYEGVALEFAFLI 673
           M++GHGG SGRF   + +AL++AF +
Sbjct: 695 MEAGHGGASGRFDFLKEIALDYAFAV 720