Pairwise Alignments

Query, 375 a.a., ribonuclease D from Klebsiella michiganensis M5al

Subject, 368 a.a., ribonuclease D (RefSeq) from Shewanella loihica PV-4

 Score =  259 bits (662), Expect = 8e-74
 Identities = 150/368 (40%), Positives = 211/368 (57%), Gaps = 7/368 (1%)

Query: 1   MNYQMITTNDGLRAVCDAASSVSAIALDTEFVRTRTYYPQLGLLQLFDGNQVSLIDPLVI 60
           M +Q +  +  L  + D       + LDTEFVRTRTYY +LGL+Q++DG  ++LIDP+ +
Sbjct: 1   MTFQYVEDDASLTELVDKYRQAKVLMLDTEFVRTRTYYAKLGLIQVYDGETLALIDPVAV 60

Query: 61  TDWQPMRELLLNKDVTKFLHAGSEDLEVFLNAFHLMPQPLIDTQILAAFCGRPMSWGFAS 120
           +D      LL   D+   LH+ SEDLEV        P+ L D+QI AAFCG     G+A 
Sbjct: 61  SDLSAFWALLERDDMISVLHSCSEDLEVLARYGRCQPKVLFDSQIAAAFCGWGHGMGYAK 120

Query: 121 MVEEFTGVALDKSESRTDWLARPLTERQCIYAAADVWYLLPIAGKLMAETDSAGWLSAAL 180
           +VE   GV LDK ESRTDW+ RPL++ Q  YAA DV YL  +  +L+ +   +G +   L
Sbjct: 121 LVEHCLGVQLDKGESRTDWMKRPLSDAQLQYAANDVDYLYRLYPQLLEKLQESGRMPWLL 180

Query: 181 DECQLMQQRRQEVQDPAEAWRDIGNAWQLRTRQLGCLQLLADWRLRKARERDLAVNFVIR 240
           +E + M Q R E  D   A+  + NA+QL  +QL  L++LA WRL+KA +RDLA+ FVI+
Sbjct: 181 EEGERMTQGRLESPDGDTAYLKVKNAFQLSPKQLAYLKVLAKWRLQKALDRDLALGFVIK 240

Query: 241 EEHLWNVARYMPTSLGELDSL-GLSGSEIRFHGKTLIGLVEKAQALPEEALPEPLQNLID 299
           +  L  +A+  P S GE+  +  L+  E R H K +I  + KA     + LPE +  +  
Sbjct: 241 DHALLALAKKQPKSTGEIFRMTELTEQEKRLHAKAIIAEMAKADL---DNLPEAIDVIAL 297

Query: 300 MPGYRKLFKDIKALVQTVSAEKGVSAELLASRRQINQLLNWHWGLKSGNGQ-PELVSGWR 358
            PGY+  FK IK  +  V+    V  ELL S+R I++ L W W    G G+ P ++ GWR
Sbjct: 298 KPGYKSAFKAIKQALTQVAETHQVPMELLGSKRHIHEYLQWRW--NDGQGEMPLVLQGWR 355

Query: 359 GALMADRL 366
           G L  D L
Sbjct: 356 GELSKDAL 363