Pairwise Alignments

Query, 361 a.a., hypothetical protein from Klebsiella michiganensis M5al

Subject, 397 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (500), Expect = 5e-55
 Identities = 132/388 (34%), Positives = 199/388 (51%), Gaps = 40/388 (10%)

Query: 3   QRRIPCLLMRGGTSKAACFLADDLP----VDPASRDAVLLATMGSPD--TRQIDGIGGAD 56
           Q ++    MRGGTSK   F   DLP    V   +RDA+LL  +GSPD   +QIDG+GGA 
Sbjct: 9   QIKVAATYMRGGTSKGVFFRLQDLPEAAQVPGPARDALLLRVIGSPDPYAKQIDGMGGAT 68

Query: 57  PLTSKVAIIRRSARPDADIDYLFAQVNVDRAVVDYGQNCGNILAVVGPFAIERGLVDCVA 116
             TSK  I+  S++ + D+DYLF QV++D+  VD+  NCGN+ A VG FAI  GL+D   
Sbjct: 69  SSTSKTVILSHSSKANHDVDYLFGQVSIDKPFVDWSGNCGNLTAAVGAFAISNGLIDAAR 128

Query: 117 ----PLTRVRIFMENTGQIAVAEVPCNTGGVEYAGDTRIDGVPGTASKIVLNFLDVAG-- 170
                +  VRI+  N G+  +A VP   G V+  GD  +DGV   A+++ + F++ A   
Sbjct: 129 IPRNGVCTVRIWQANIGKTIIAHVPITDGAVQETGDFELDGVTFPAAEVQIEFMNPAADD 188

Query: 171 -SSCGALLPTGQASDRFD--GI---EVTCIDNGMPVVLIRASDLGRTGYETREQLDADDE 224
               G + PTG   D  +  GI     T I+ G+P + I A DLG TG E ++ +++D+ 
Sbjct: 189 DGEGGCMFPTGNLVDVLEVPGIGRFNATMINAGIPTIFINAEDLGYTGTELQDDINSDNA 248

Query: 225 LKQRLETIRLQAGPRMNL-----GDVTQRTVPKMTLIARPRAGGAISSRTFIPHRC---- 275
              + ETIR     RM L        +++  PK+  +A P++  + S +T          
Sbjct: 249 ALAKFETIRAHGALRMGLIKHIDEAASRQHTPKIAFVAPPKSYASSSGKTVAAEDVDLLV 308

Query: 276 ---------HASIGVFGAVSVASACLIPGSVAQALASLERTPELSVEHPTGEFSV-ALRL 325
                    HA +G   AV++ +A  IPG++    A       +   HP+G   V A  +
Sbjct: 309 RALSMGKLHHAMMGT-AAVAIGTAAAIPGTLVNLAAGGGEKEAVRFGHPSGTLRVGAQAV 367

Query: 326 DDNGQ--LAGCGLLRTARLLFAGDVCIP 351
            +NG+  +    + R+AR+L  G V +P
Sbjct: 368 QENGEWTVIKAIMSRSARVLMEGFVRVP 395