Pairwise Alignments

Query, 361 a.a., hypothetical protein from Klebsiella michiganensis M5al

Subject, 396 a.a., 3-methylitaconate isomerase from Herbaspirillum seropedicae SmR1

 Score =  207 bits (526), Expect = 5e-58
 Identities = 142/395 (35%), Positives = 202/395 (51%), Gaps = 46/395 (11%)

Query: 3   QRRIPCLLMRGGTSKAACFLADDLP----VDPASRDAVLLATMGSPDT--RQIDGIGGAD 56
           Q RIP   +RGGTSK   F  DDLP    V   +RD +L   +GSPD   +QIDG+GGA 
Sbjct: 6   QIRIPATYLRGGTSKGVFFKLDDLPEAARVPGPARDKLLQRVIGSPDPYGKQIDGMGGAT 65

Query: 57  PLTSKVAIIRRSARPDADIDYLFAQVNVDRAVVDYGQNCGNILAVVGPFAIERGLV---- 112
             TSK  II RS RP  D+DYLF QV++D+  VD+  NCGN+ A VGPFAI  GLV    
Sbjct: 66  SSTSKTVIISRSVRPGHDVDYLFGQVSIDQDFVDWSGNCGNLSAAVGPFAIAAGLVDPSR 125

Query: 113 ---DCVAPLTRVRIFMENTGQIAVAEVPCNTGGVEYAGDTRIDGVPGTASKIVLNFLDVA 169
              D VA +T   I+  N G+  VA VP   G V+  GD  +DGV   A+++ L F+D A
Sbjct: 126 LPQDGVAVIT---IWQANIGKTIVAHVPMRGGQVQETGDFELDGVTFPAAEVQLEFMDPA 182

Query: 170 G---SSCGALLPTGQASDRFD-----GIEVTCIDNGMPVVLIRASDLGRTGYETREQLDA 221
                + GA+ PTG   D  +       + T I+ G+P + ++A ++G TG E ++ +++
Sbjct: 183 AEEEGAGGAMFPTGNVVDTLEVPGVGSFQATMINAGIPTIFLKAEEIGYTGTELQDAINS 242

Query: 222 DDELKQRLETIRLQAGPRMNL-----GDVTQRTVPKMTLIARPRAGGAISSRTFIPHRC- 275
           D     R ETIR     RM L        T++  PK+  +A PR   + S +T       
Sbjct: 243 DPAALARFETIRAHGAMRMGLISKVEEAATRQHTPKVAFVAAPREYVSSSGKTVTVQDTD 302

Query: 276 ------------HASIGVFGAVSVASACLIPGSVAQALASLERTPELSVEHPTGEFSVA- 322
                       HA +G   AV++ +A  IPG++    A       +   HP+G   V  
Sbjct: 303 VLVRAMSMGKLHHAMMGT-AAVAIGTAAAIPGTLVNLAAGGGERNSVRFGHPSGTLRVGA 361

Query: 323 -LRLDDNGQLAGCGLL-RTARLLFAGDVCIPADVW 355
             +L+D   +    ++ R+AR+L  G V +P D +
Sbjct: 362 EAKLEDGQWVVTKAIMSRSARVLMEGWVRVPGDAF 396