Pairwise Alignments

Query, 344 a.a., LacI family transcriptional regulator from Klebsiella michiganensis M5al

Subject, 353 a.a., Novel Xylose regulator from LacI family (from data) from Phaeobacter inhibens DSM 17395

 Score = 97.8 bits (242), Expect = 4e-25
 Identities = 89/325 (27%), Positives = 143/325 (44%), Gaps = 25/325 (7%)

Query: 5   KVTMTDIARDAGVGIATVDRVLNKRAAVKESTERKVLESARRLGFALEQSHYRLAAGQSA 64
           K T+ D+A  AGV  AT DRVLN R  V + ++ +V  +   LG+  +     + A   +
Sbjct: 3   KPTLHDVAAAAGVSYATADRVLNNRGGVAKKSQDRVRAAIADLGYQRD-----ITAANLS 57

Query: 65  IALRMGFILLQPS--HSFYQQLAQALEQAALAWHSP------TQAPVFLHYDINAIDDMA 116
              R  F +L P+    F+  L   LEQ   A          TQ P F    +    +  
Sbjct: 58  RRRRYRFAVLMPAAQEGFFATLHADLEQEVAARSQARQQITLTQVPPFDAAALTCALEAC 117

Query: 117 AAIGRLSAEVDVIGIVALDNPLIRHALIQAIDKGVHVFTLLSDMSIPQRTGYIGLDNQKA 176
           AA G      D + +VA+ +P +  AL     +GV V TL++D +   R  Y+G+DN++A
Sbjct: 118 AAEG-----YDGVCLVAVQDPSVDAALTGLRAQGVAVVTLVADSAAQARDTYVGIDNRRA 172

Query: 177 GRTAGWAVDRLCH--GDGEIGIIVGDNRFICQESCEISFRSYLREQGKGDRVLEPVRSHE 234
           GRTAG  + RL H      +G I+     +        +  +         +L P+ + +
Sbjct: 173 GRTAG-DLMRLAHRGSAASLGQILPITGSLNARDHADRYAGFCDVVSADLHILPPLETGD 231

Query: 235 RADVARQVTEEMLQQYPDLKAIYAPCGGVEGIVDALRARQRQHQVTLICHG--PVDNGEL 292
             ++  Q     L+  P++  IY    G+ G++ AL A Q   +  +I H   P     +
Sbjct: 232 DPEILEQALRRTLRANPNITGIYNLGAGIPGLISALAAIQPDDRPVVISHELCPATRDAV 291

Query: 293 A--LIDGTVDLMLAHRLSEFAAATI 315
           A  LID  +D   A  ++   AA +
Sbjct: 292 AHGLIDAVIDQKPAQEITAALAALV 316