Pairwise Alignments

Query, 550 a.a., MFS transporter from Klebsiella michiganensis M5al

Subject, 539 a.a., drug resistance transporter, EmrB/QacA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 102/503 (20%), Positives = 192/503 (38%), Gaps = 35/503 (6%)

Query: 43  GLLVCLTGALGNAVVTANLQLLQGTFAAWSTEIAWLPAVYVMTNVSINLLLVKFRQQFGL 102
           GL+      L   +  A+++ +QG+  A   E +W+   Y++  +    L         +
Sbjct: 38  GLIGAFMAILDIQITNASMKEIQGSLGATLEEGSWISTAYLVAEMIAIPLSGWLSTGLSV 97

Query: 103 RAFTEGFLVLYVLVTFFHLFVNDLSSALMVRAAHGMVAAALSSLGIYYQVQAWPARHRLK 162
           R +       ++  +       +L S +  RA  G    AL  L     ++  P   R  
Sbjct: 98  RRYLLWTTAAFIFASILCSISWNLESMIAFRALQGFFGGALIPLAFRLILEFLPENKRAV 157

Query: 163 ALTIGITGSSLAIPLARLFSTELLQIDEWRGLYFFELGLALVSLACVIALKLPPSDRKKV 222
            + +    ++ A  +       L +   W  L++  +   L+ +A ++A  L    R  V
Sbjct: 158 GMALFGVTATFAPSIGPTLGGWLTEHFSWHYLFYINVPPGLLVMA-MLAYGL--EKRPVV 214

Query: 223 FEK---KDFITFFLLAPGMALVTAVLSLGRLDWWFEAPWIGWALAGAVVLIVSAIAFEHN 279
           ++K    D      +A GM  +  VL  G    WF +  I      A V +V  +  + N
Sbjct: 215 WDKLKNADLAGIVTMALGMGCLEVVLEEGNRKDWFGSDLIRNLAIIAAVNLVLFVWIQLN 274

Query: 280 RSNPLLNIKWLSSGSILRLGLIMLLIRIVLAEQNTGVIGWLQYVGLQNEQMTN------- 332
           R +PL+N++ L     +   +   L+ + L        G +  + L   Q+ +       
Sbjct: 275 RKDPLVNLRLLGKRDFVLSTVAYFLLGMAL-------FGAIYLIPLYLSQVHDYTPLEIG 327

Query: 333 --LAWSIFAGILCGIVASCLTLNPQRLY-----WPTATALALIMVGSLLDSQSTILTRPE 385
             + W  F  +L       L L P+ +      +  A    +  +   ++SQ T     +
Sbjct: 328 EVIMWMGFPQLL------VLPLVPRLMQRFDGRYLAAFGFFMFALSYYMNSQMTADYAGQ 381

Query: 386 QLMFSQFLLGFGSAFFLAPAMLAGIGGVIADQRNLVSFSVLFGMSQNIGGLLGSAILGTF 445
           Q++ SQ +   G  F L P  +     +   +    S S +  + +N+GG  G A++ T 
Sbjct: 382 QMIASQVVRALGQPFILVPIGMLATAHLKPHEN--PSASTVLNVMRNLGGAFGIALVATL 439

Query: 446 QTWREKFHSSQLADQLTTLNPLITERLQQYSQMYQSQIGDSTLLNVQATTLLQNAATLQA 505
                + H + + + L  ++    + L Q + + Q    D      QA  LL    + QA
Sbjct: 440 TDNLSRSHLAHVKESLPAVSAQAQDYLNQSASLLQMGGSDPYTAAAQAKALLAKTMSQQA 499

Query: 506 NILAYNDTYLLTAAISAATLVWV 528
            I AYND + +  A+    +V V
Sbjct: 500 YIQAYNDVFFIMGALLLIAVVAV 522