Pairwise Alignments

Query, 459 a.a., NodT family RND efflux system outer membrane lipoprotein from Klebsiella michiganensis M5al

Subject, 491 a.a., RND transporter from Herbaspirillum seropedicae SmR1

 Score =  238 bits (608), Expect = 3e-67
 Identities = 167/467 (35%), Positives = 244/467 (52%), Gaps = 25/467 (5%)

Query: 5   LALAVI-LALAGCQSADVQQAAPGLQIPAAWRADVGPSSPVEGV--------------WW 49
           L LAV+ L L  CQS      AP  Q PAA  A V P  PV                 W 
Sbjct: 13  LLLAVLPLCLTACQSL-----APHYQRPAAPVAAVYPDGPVNEAAHQVANEAASPPLPWR 67

Query: 50  RNFHDSTLNLYVDQALRYNSDVLMARERVNEYQARAYAADSSLFPSL--DAGLTGTRARS 107
             F D  L   + QAL  + D+  A  RV E QA      + LFP++   AGL  +R  +
Sbjct: 68  DYFTDPPLQALITQALENSRDLRTAALRVQEAQALYGIGHADLFPTIGAQAGLDRSRTPA 127

Query: 108 QSAATGLPVHSTVYKGAL-TASYDVDIWGANRSASSAAQASLEAQKAAAAAANLTVASSV 166
               T  P+  + Y+  L  +S+++D+WG  RS   AA  S  A +A  +A  L++ + V
Sbjct: 128 DLNLTRRPLVGSAYQAGLGLSSWEIDLWGRLRSLDDAALESARASQATRSAVALSLMAQV 187

Query: 167 AVGYITLLSLDEQLRVTQQTLKSREDAFNLAKRQFETGYTSRLELMQADSELRSTRAQIP 226
           A  ++ L  LDE+L +  QT+ SR+++F +  R+ E G TSRL L Q ++ L   +A   
Sbjct: 188 ADAWLELAELDERLEIANQTIASRQESFRIFSRRVEVGATSRLNLTQIETLLTQAQALGA 247

Query: 227 PLRHQIAQQENALSLLLGANPGAVKRNAFAQLSPLSLPSQ--LPSTLLNRRPDIVQAQRQ 284
            L+ Q AQ+ NAL+LL+G+        A A L  +  P Q  LP+ LL RRPD+  A+ +
Sbjct: 248 QLQQQRAQRLNALTLLVGSPVVLPVGQARAGLDAVFAPLQPGLPALLLTRRPDVAAAEHR 307

Query: 285 LVAADATLASSQAQLLPSINLTATGSLQDRTLPDLLDNPLRLWSLGGSILAPLLNRQALN 344
           L+AA+A + +++A   PSI+LT         L  L  +    W+   SI  P+     L 
Sbjct: 308 LMAANANIGAARAAFFPSISLTGNVGTASAELSGLFRDGSHAWTFSPSITLPIFTAGRLR 367

Query: 345 AQVDVSMAQRNQALYSYEKTVRGALKEVNDSLDAIGRYGEQLSELQAQEKVAQETLRIAQ 404
             + +S  +R+ A+ +YEKTV+ A +EV D+L A     +QL   Q+  +V +E  R++ 
Sbjct: 368 NNLALSEVRRDLAVAAYEKTVQTAFREVADALAARQWLTQQLEIAQSAVRVQRERARLSA 427

Query: 405 NRYRNGYSSYLDVLDAQRTLFSTQLSVVQVKNNLLLAQVDLYRSLGG 451
            RY NG + +LDVLDAQR L S Q  +VQ++  LL + V LY +LGG
Sbjct: 428 LRYDNGAAPFLDVLDAQRDLLSAQQQLVQIRRALLSSSVALYAALGG 474