Pairwise Alignments

Query, 324 a.a., phage shock protein operon transcriptional activator from Klebsiella michiganensis M5al

Subject, 551 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  227 bits (579), Expect = 5e-64
 Identities = 137/322 (42%), Positives = 187/322 (58%), Gaps = 6/322 (1%)

Query: 2   ADYKDNLLGEANSFLEVLEQVSRLAPLDKPVLVIGERGTGKELIASRLHFLSSRWQGPFI 61
           AD    ++G+  ++L VL QV  +AP D  VLV GE GTGKEL+A  +H  S R   P +
Sbjct: 219 ADGNLPIVGDCPAWLRVLAQVDMVAPTDATVLVQGESGTGKELVAEAIHRRSQRSTAPLV 278

Query: 62  SLNCAALNENLLDSELFGHEAGAFTGASKRHPGRFERADGGTLFLDELATAPMLVQEKLL 121
            +NC+A+   L +SE FGH  GAFTGA +   GRF+ ADGGTLFLDE+   P+ +Q KLL
Sbjct: 279 RVNCSAIPRELFESEFFGHVKGAFTGAVRDRIGRFQMADGGTLFLDEVGEIPLELQGKLL 338

Query: 122 RVIEYGELERVGGSQPLQVNVRLVCATNADLPQMVEDGLFRADLLDRLAFDVVQLPPLRE 181
           RV++ G  ERVG  +   V+VR++ ATN DL Q V+ G FR DL  RL+   V+LPPLR+
Sbjct: 339 RVLQEGTFERVGEDRTRSVDVRIIAATNRDLRQEVDAGRFRQDLFFRLSVFPVELPPLRD 398

Query: 182 RQSDIMLLATQFAIQMCRELGLPLFPGFSERAAETLQNYRWPGNIRELKNVVERSVYRHG 241
           RQ DI LLA  F  Q  R LGLP  P  +  A   L  Y WPGN+RE++NV+ER+V    
Sbjct: 399 RQGDIPLLARHFIAQSSRRLGLPT-PRLTPAALARLSAYPWPGNVREMQNVIERAVIMAE 457

Query: 242 SSERELDNIIINPFRQQHTATPVEVEKTPGPTLPLDLRAFQQEQEKSLLERSLEQAK--- 298
                +D  +  P   +H          PG T  +    ++  Q  + + R+L+ A+   
Sbjct: 458 EGALGMD-ALPAPEGLRHDDRVSVAAPAPGATTIVTEEEWRTMQRDN-IRRALQAAEGRV 515

Query: 299 YNQKQAAELLGLTYHQLRALLK 320
           +    AAELLG+    LR+ ++
Sbjct: 516 HGVGGAAELLGIPPTTLRSRMQ 537