Pairwise Alignments

Query, 324 a.a., phage shock protein operon transcriptional activator from Klebsiella michiganensis M5al

Subject, 462 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  233 bits (595), Expect = 5e-66
 Identities = 135/318 (42%), Positives = 197/318 (61%), Gaps = 14/318 (4%)

Query: 8   LLGEANSFLEVLEQVSRLAPLDKPVLVIGERGTGKELIASRLHFLSSRWQGPFISLNCAA 67
           ++GE+ +  +V   + R+APL+  VL++GE GTGKELIA  +  LS R   PF+ +NCAA
Sbjct: 143 IVGESRAMRDVKALLERIAPLESTVLIMGESGTGKELIADTIRALSPRAANPFVKVNCAA 202

Query: 68  LNENLLDSELFGHEAGAFTGASKRHPGRFERADGGTLFLDELATAPMLVQEKLLRVIEYG 127
           + E+L ++ELFGHE GAFTGA+   PG+FE+A GG + LDE+   P+ +Q KLLRV+E  
Sbjct: 203 IPEHLFENELFGHEKGAFTGAATAMPGKFEQAQGGMIMLDEIGDMPLAIQPKLLRVVEQK 262

Query: 128 ELERVGGSQPLQVNVRLVCATNADLPQMVEDGLFRADLLDRLAFDVVQLPPLRERQSDIM 187
           ++ER+GG  P+ ++VR++ ATN +L + V +  FR DL  RL+  VV +PPLR+R+ DI 
Sbjct: 263 QVERLGGRAPVPLDVRIIAATNQNLAERVREKAFREDLYYRLSVAVVLIPPLRDRKDDIP 322

Query: 188 LLATQFAIQMCRELGLPLFPGFSERAAETLQNYRWPGNIRELKNVVERSVYRHGSSEREL 247
           LLA  F  ++   LGLP+  G S  A   L ++ WPGN+R+L NV+ER+           
Sbjct: 323 LLAQYFVNKLEGTLGLPVH-GLSPDAIAVLMDHDWPGNVRQLANVLERAAI-------AA 374

Query: 248 DNIII--NPFRQQHTATPVEVEKTPGPTLP-LDLRAFQQEQEKSLLERSLEQAKYNQKQA 304
           D +I   +      TA    V+K    TL  +DL+   +  E++L+  +L +    Q +A
Sbjct: 375 DGLICARDVMAAIGTARGSNVDKA---TLSGMDLKTTLRMVERNLILDALRRCHGRQTEA 431

Query: 305 AELLGLTYHQLRALLKKH 322
           A LLGLT   L A L+KH
Sbjct: 432 AVLLGLTPKNLWAKLRKH 449