Pairwise Alignments

Query, 409 a.a., integrase from Klebsiella michiganensis M5al

Subject, 408 a.a., phage integrase family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  112 bits (281), Expect = 2e-29
 Identities = 105/415 (25%), Positives = 181/415 (43%), Gaps = 41/415 (9%)

Query: 16  LTDTKLRKALSKKRDKIEVISDAHGLNVRLSTSGSITFFYRYR--WNGKAVQLTIGDYPT 73
           L DT++R+A  K R+K   +SD +GL +R+   GS T+   Y    + K   LT+G YP 
Sbjct: 8   LNDTEVRQA--KPREKEYNLSDGNGLMLRVRPIGSKTWLLNYSRPTSRKRANLTLGTYPE 65

Query: 74  ISLSQARERRQQLRAWLTEGLDPRRQTVLEKQKKTEALTVKEAFD-YWEKFYCIPEGLVK 132
           ++L+ AR +    R  + + +DP+     E Q++  A   +  F+    +++ I +   +
Sbjct: 66  LTLADARRKALDARKLIAQDIDPQEHR--EGQRQALAAIHEHTFENVATQWFDIKK--TE 121

Query: 133 IKVNR-----RDFNNHIAPVLGDMIVDQTTKAHWLNLF---DGMGRRVVTGQMLGLMQRT 184
           I  N      R F  H+ P +G   + Q T    + +F   +  G      ++   +   
Sbjct: 122 ITENHAASTWRSFKLHVLPYIGSTPISQITAPMVIEIFRPIEAKGSLETVKRLTQRLNEV 181

Query: 185 FRFCSNRGVINFNPIESLRRSDVGLTAAVKDRWLSDEEIKAVWNVLPEM---------KH 235
             +  N G+I+ NP+        G+ AA K          A +  LPE+         K 
Sbjct: 182 MTYAVNTGLIHANPLS-------GIKAAFKKPKKQKMAAMAPYE-LPELLSTLSRASIKR 233

Query: 236 RQQLIMKFLIMTGCRSTEIRTAKWEWFDFQEEAWTIPASDYKTGKSVRRALPEAVVRMMK 295
             +L++++ + T  R  E   A+W+ F+F +  WTIPA   K  +     +P +   M+ 
Sbjct: 234 VTRLLIEWQLHTMTRPNEAAGARWDEFNFDDRLWTIPAERMKMKR--EHVIPLSDACMLI 291

Query: 296 AEKETSLSNHVVTLSRYKGPEDDRPPLQPNVASFSAQIVARTGMKTWSLHDLRRTIATRL 355
            ++  S+S H      Y  P D  P    NV + +A +         + H LR   +T L
Sbjct: 292 LQELKSISGH----REYLFPADRNPKTHSNVQTANAALKRMGLQDRTTAHGLRALASTTL 347

Query: 356 SELGAPPHVIEKLLGH-HMSGVMARYNLHDYLDDQRHWLGVWQSHLESLIGQPLV 409
           +E G    V+E  L H   + V + YN   YL+ +R  +  W   ++S     L+
Sbjct: 348 NEQGFDWDVVEAALAHTDKNQVRSAYNRATYLERRREMMEWWSKSIKSAEANMLI 402