Pairwise Alignments

Query, 644 a.a., exoribonuclease II from Klebsiella michiganensis M5al

Subject, 678 a.a., exoribonuclease 2 from Vibrio cholerae E7946 ATCC 55056

 Score =  669 bits (1726), Expect = 0.0
 Identities = 338/650 (52%), Positives = 447/650 (68%), Gaps = 9/650 (1%)

Query: 1   MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDSQKSYFIPPPQMKKVMHGDRI 60
           MFQDNPLLAQLKQ++    P+ EG +K ++KGFGFLEVDS+ SYF+PPP MKK MHGD++
Sbjct: 1   MFQDNPLLAQLKQKIQETLPKKEGTIKASDKGFGFLEVDSKTSYFVPPPYMKKCMHGDKV 60

Query: 61  IAVVNTEKERESAEPEELVEPFLTRFVGKVHKKDDRLSIVPDHPLLKD-AIPCRAARGV- 118
           +A + TE ERE AEP EL+E  LTRF+G+V     +L++ PDHP LK  ++  +  +G+ 
Sbjct: 61  VAFIRTENEREVAEPSELIEQSLTRFIGRVKLFKGKLNVAPDHPQLKKLSLKAKTKKGLN 120

Query: 119 EHDFKEGDWGVAEMRRHPLKGDRGFYAELTQYITYGDDHFVPWWVTLARHNLEKEAPDGV 178
           E DF+EGDW VA + RHPLKGD GF+ +++  IT  +D   PWWVTLA ++L    P G+
Sbjct: 121 EADFQEGDWVVAHLVRHPLKGDDGFFVQISHKITDANDKIAPWWVTLAENDLPNSEPAGI 180

Query: 179 ATEML--DEGLERRDLTELAFVTIDSASTEDMDDALYVEQNADGKLHLTVAIADPTAWIA 236
               L  D  L R DLT L FVTID  ST+DMDDALY +Q  +G   LT+AIADPTA+I 
Sbjct: 181 DDWQLKDDADLVREDLTALPFVTIDGESTKDMDDALYAQQLPNGDFALTIAIADPTAYIT 240

Query: 237 EGSKLDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNAVRPVLACRMILADDGAIED 296
              ++D  A+ R FT YLPG NIPMLPR+L+D+LCSL  N VRP L C + +  DG I D
Sbjct: 241 PEDEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLMENQVRPALCCSVTIRKDGVIGD 300

Query: 297 DIQFFAATIESKAKLAYDDVSDWLENNGS--WQPDSETVARQIKLLQEVCLRRSEWRKNH 354
           DI+FFAA I+S A+L YD VSDWLE   S  WQP SE +A+ ++ L      R+ WR+ H
Sbjct: 301 DIRFFAANIKSHARLVYDHVSDWLETGSSEQWQP-SEEIAQVVRDLYAFSQARANWRETH 359

Query: 355 ALVFKDRPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYN 414
           A+VF DRPDYRF L    +V+ I A+ RR ANR+VEESMI ANICA + L+   GFGV+N
Sbjct: 360 AVVFPDRPDYRFELSADNDVVAIHADMRRTANRLVEESMITANICAGKTLQTTFGFGVFN 419

Query: 415 VHTGFDPANTEQLAALLKTHDV-HVDPVEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQS 473
            H GF       +  L+  +   + D   + T+EGF  LRR L  Q + +LD+RIR++QS
Sbjct: 420 THAGFKAEKMADVVELMAVNGAPNADAETLATVEGFAALRRWLATQETSYLDNRIRKYQS 479

Query: 474 FAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGEA-ISRPQDDVAIQMA 532
           ++EI  +P PHF +GL+ YATWTSPIRKYGDMINHRLLKA I G+A +  P + V  ++A
Sbjct: 480 YSEIGNQPLPHFAMGLDVYATWTSPIRKYGDMINHRLLKAHILGKAPVQTPDETVGEELA 539

Query: 533 ERRRLNRMAERDVGDWLYARYLNPQAGTTTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAP 592
             R+ +++AER+V DWLYAR L  +    TRF AEI D++R GMRVRL++NGA+AFIP  
Sbjct: 540 LHRKHHKIAERNVADWLYARTLADEPAKETRFQAEIFDINRPGMRVRLLENGAMAFIPGA 599

Query: 593 FLHAVRDELVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARP 642
            +   ++ + C+ E+GTV I  EVVYK+ DV+++ + EV  E RS++ +P
Sbjct: 600 LILDNKERIECNGEDGTVLIDKEVVYKLGDVLEIVLTEVNQENRSLVGKP 649