Pairwise Alignments

Query, 644 a.a., exoribonuclease II from Klebsiella michiganensis M5al

Subject, 813 a.a., exoribonuclease R from Marinobacter adhaerens HP15

 Score =  191 bits (486), Expect = 8e-53
 Identities = 167/587 (28%), Positives = 261/587 (44%), Gaps = 65/587 (11%)

Query: 22  VEGVVKGTEKGFGFLEVDSQKS-YFIPPPQMKKVMHGDRIIAVVNTEKERESAEPE--EL 78
           V G V G + GFGFL  D   S  F+   QM++V HGDR+ A V+   +R   E    E+
Sbjct: 46  VTGRVIGHKDGFGFLVPDDGGSDLFLTARQMRQVFHGDRVAARVDRVDDRGRREGVIVEV 105

Query: 79  VEPFLTRFVGKVHKKDDRLSIVPDHPLLKDA--IPCRAARGVEHDFKEGDWGVAEMRRHP 136
           +E   ++ VG+  ++     +VP++  +     IP        H    G + V ++ R P
Sbjct: 106 LEYRTSQTVGRFFQESGISFVVPENARINHEVLIPQENCGNARH----GQYVVVDIVRQP 161

Query: 137 LKGDRGFYAELTQYITYGDDHFVPWW---VTLARHNLEKEAPDGVATEML--------DE 185
               +     L + +    +H  P     V +  +++    P  V  +           +
Sbjct: 162 TVRTQ----PLGKVVEVLGEHMAPGMEIDVAIRSYDIPHSWPPAVGEQTAAIPEEVTEKD 217

Query: 186 GLERRDLTELAFVTIDSASTEDMDDALYVEQNADGKLHLTVAIADPTAWIAEGSKLDNTA 245
            + R+D+  L  VTID  +  D DDA+Y E  A G   L VAIAD + ++  G+ LD  A
Sbjct: 218 KVNRKDIRNLRLVTIDDETARDFDDAVYCEPRARGGYRLLVAIADVSHYVRPGTPLDEEA 277

Query: 246 KIRAFTNYLPGFNIPMLPRELSDDLCSLRPNAVRPVLACRMILADDGAIEDDIQFFAATI 305
             R+ + Y P   +PMLP +LS+ LCSL P   R  +   M ++  G I     F+ A +
Sbjct: 278 VNRSTSVYFPDHVVPMLPEKLSNGLCSLNPGVDRLCMVADMTISAAGNI-SSYSFYQAVM 336

Query: 306 ESKAKLAYDDVSDWLENNGSWQPDSE----------TVARQIKLLQEVCLRRSEWRKNHA 355
            S A+L Y+ VS  LE+     PD+E           V  Q+  L  +     + R    
Sbjct: 337 FSHARLTYNKVSTMLEH-----PDTEQGYKLCEQYANVLPQLHNLYGLYQLLRKARTERG 391

Query: 356 LVFKDRPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNV 415
            +  +  + + V     ++ +IV   R  A++I+EE M+ AN+  AR L+      +Y V
Sbjct: 392 AIDFETTETKIVFDADRKIEEIVPVQRNDAHKIIEECMLCANVATARFLKKHKLPALYRV 451

Query: 416 HTGFDPANTEQLAALLKTHDVHVDPVEVLTLEGFCKLRREL-DAQPSGFLDSRIRRFQSF 474
           H G        +   L    + +   +  T   + +L   + D   +  + + + R  S 
Sbjct: 452 HDGPSEERLNAVRLFLGELGLQLGGGDSPTSADYQELLNSIKDRSDANVIQTVMLRSLSQ 511

Query: 475 AEISTEPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKG-----EAISRPQDDVAI 529
           A  S E G HFGLG   YA +TSPIR+Y D+INHR +K++I G     + +  P+ D  +
Sbjct: 512 AVYSPEEGGHFGLGYAGYAHFTSPIRRYPDLINHRAIKSVIHGGQPSKDVVPPPKPDPEL 571

Query: 530 -----------------QMAERRRLNRMAERDVGDWLYARYLNPQAG 559
                             MAERR  +  A RDV  WL   YL+   G
Sbjct: 572 AEYPYDMARMEQLGEHTSMAERRADD--ATRDVMAWLKCEYLSDHVG 616