Pairwise Alignments

Query, 651 a.a., DNA topoisomerase III from Klebsiella michiganensis M5al

Subject, 686 a.a., DNA topoisomerase III from Marinobacter adhaerens HP15

 Score =  450 bits (1158), Expect = e-131
 Identities = 262/642 (40%), Positives = 376/642 (58%), Gaps = 33/642 (5%)

Query: 1   MRLFIAEKPSLGRAIAEVLPKPHRKGDGYIECGNGQVVTWCIGHLLEQAQPDVY------ 54
           M+LFIAEKPS+ +AIA  L     KGDGYIECG G  VTWC GH+LEQA PD Y      
Sbjct: 1   MKLFIAEKPSVAKAIAAELGVTG-KGDGYIECG-GDKVTWCFGHMLEQAGPDEYTPDDVP 58

Query: 55  --DARYARWNLLDLPIVPEKWQLQPKPSVTKQLNVIKRLLGDAQEVIHAGDPDREGQLLV 112
             D     W + +LPI+P++W L+PK    KQ+ VI  LL  A ++++AGDPDREGQLLV
Sbjct: 59  TNDKGRKIWRVDELPIIPDEWILRPKDDAKKQVRVIGGLLKSASQIVNAGDPDREGQLLV 118

Query: 113 DEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAINRLRANSEFVPLCVSALARARADWLY 172
           DE+L++       ++ V R   N ++  +V+RA+  ++ N E+     +A  R +ADWL 
Sbjct: 119 DELLEHFN----NKKPVIRYWSNAIDSVSVKRALANMKDNQEYHGFADAAEGRGKADWLI 174

Query: 173 GINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFDVKAHIVTPK 232
           G+N++RAYT+  +  G + +L+VGRVQTP L LVV RD EIE+F A  F  ++A I  P 
Sbjct: 175 GMNLSRAYTLRAQRGGSRALLTVGRVQTPTLALVVTRDREIESFKAVPFHTIRAEIQHPN 234

Query: 233 DERFVATWVPSEACEPYQDEEGRLLHRSLAEHVVKRIEGQPATVTAYNDKRDSEPAPLPF 292
              F A+W   E  +   D EGRL+  ++A  +V+ + G+P +++ Y  +   +  PL F
Sbjct: 235 GA-FWASWKAKED-QAGLDAEGRLVDTAVANALVESLTGKPGSISEYKQEAKKQNHPLTF 292

Query: 293 SLSALQIEAAKRFGFSAQNVLDICQKLYETHKLITYPRSDSRYLPEEHFAGRHAVLNAIS 352
           SLS +   A+KRFG+SA++VL  CQ LYETHKL TYPR+D  YLPE  FA    VL   S
Sbjct: 293 SLSDMTALASKRFGYSAEDVLKTCQSLYETHKLTTYPRTDCAYLPESQFADAPDVL--AS 350

Query: 353 VHAADLLPQPVVD---PEIRNRCWDDKKVDAHHAIIPTARSSQV-KLSDNEEKVYGLIAR 408
           V A +     +VD     IR+R W+DKKV AHH IIPT     + KL+D E  +Y L+ R
Sbjct: 351 VKAVNPSLASIVDGADTSIRSRTWNDKKVSAHHGIIPTMHKGDLNKLNDKERNIYDLVVR 410

Query: 409 QYLMQFCPDAVFRKCQIDLDIANGKFVAKARFLAEAGWRTL-LGNKERDE---ENDGMPL 464
            YL QF P   F    + +D+    F AK + + ++GW  + L N + D+   +++   L
Sbjct: 411 AYLAQFYPVHEFMSTTVTVDVEGETFSAKGKVVTKSGWHDVYLDNSDEDDSDQDDESQSL 470

Query: 465 PVVAKDDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGT 524
           P + + D + C +    + +T+PP  FT+ TL++AM  I RFV D   KK+LR  DG+GT
Sbjct: 471 PKMGQGDAITCGQAARRDAKTKPPARFTEGTLITAMVNIHRFVTDPQHKKMLREGDGIGT 530

Query: 525 EATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESILTQISEK 584
           EATRA II  L +R +L  KG+ I ST  G+++  +LPE+   P +TA +E +L  +   
Sbjct: 531 EATRASIISELKRRNYLETKGKQIISTTLGRSMIDALPEVVKSPVLTALYERMLQSVESG 590

Query: 585 QCRYQDFMQPLVGTLFQLIDQARSTPVRRFRGIVAPGDGKKS 626
           +     F+      + + + +A         G VA   GK++
Sbjct: 591 KADLAAFITKQEAFIREQVAKAND-------GAVAIAGGKEA 625