Pairwise Alignments

Query, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Klebsiella michiganensis M5al

Subject, 365 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  219 bits (559), Expect = 7e-62
 Identities = 126/338 (37%), Positives = 190/338 (56%), Gaps = 26/338 (7%)

Query: 6   RHLLAAGA---LAVGMSAAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESN 62
           R+ L  GA   LAV + AA      T++ YNW++Y+    L  F K TGIK +Y  ++SN
Sbjct: 8   RNALLVGAGLTLAVSVQAA-----STVHIYNWSDYIGETTLADFEKATGIKPVYDVFDSN 62

Query: 63  ETMYAKLKTYKDGAYDLVVPSTYFVDKMRKEGMLQKIDKSKLSNFGNLDPEMLNK--PFD 120
           ET+  KL   + G YD+VVPS +F+ K  K G  QK+DK++L N+ NLDP +L +    D
Sbjct: 63  ETLEGKLLAGRTG-YDVVVPSNHFLGKQIKAGAFQKLDKAQLPNYANLDPVLLKRLEKND 121

Query: 121 PNNDYSIPYIWGATAIGINSDEIDP----KTVTSWADLWKPEYKSSLL-----LTDDARE 171
           P N Y++PY+WG   IG N ++I        + SWA L++PE    L        D   E
Sbjct: 122 PGNQYAVPYLWGTNGIGYNVEKIKAVLGVDKIDSWAMLFEPENIKKLSNCGVSFLDSGDE 181

Query: 172 VFQVALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 231
           +    L  LG + N+ DP++ + A  +L K+ P V  FNS    +    GE+ +   ++G
Sbjct: 182 MIPAMLNYLGLNPNSEDPEDYKKAEAQLLKIRPYVTYFNSSKYISDLANGEICVAAGFSG 241

Query: 232 SAWVARQ----AGTPLEVVW--PKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPEIAK 285
             + AR+    AG  +E+ +  PKEGG  W D L+IP +A NV  A   IN++L+PE+  
Sbjct: 242 DIFQARERASEAGKGVEIAYVIPKEGGNLWFDMLAIPRDATNVKQAHAFINYVLKPEVIA 301

Query: 286 QVAETIGYPTPNLAARKMLSPEVANDKSLYPDAATIQK 323
           QV++T+GY  PN  A +++  +V  D+++YP  A + K
Sbjct: 302 QVSDTVGYANPNPKAGELMDQKVRTDEAVYPPQAVVDK 339