Pairwise Alignments

Query, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Klebsiella michiganensis M5al

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  407 bits (1046), Expect = e-118
 Identities = 206/349 (59%), Positives = 254/349 (72%), Gaps = 7/349 (2%)

Query: 1   MKKWSRHLLAAGALAVGM-SAAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTY 59
           MKK +  LLA  A A+ + S   A + K L F NW  Y+  G+LEQFTKETGIKVIYSTY
Sbjct: 1   MKKLAT-LLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTY 59

Query: 60  ESNETMYAKLKTYKDGAYDLVVPSTYFVDKMRKEGMLQKIDKSKLSNFGNLDPEMLNKPF 119
           ESNET+YAKLKT+  G YDLVVPSTYFV KMR EGMLQKIDKSKLSNF NLD   L+KP+
Sbjct: 60  ESNETLYAKLKTHNQG-YDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPY 118

Query: 120 DPNNDYSIPYIWGATAIGINSDEIDPKTVTSWADLWKPEYKSSLLLTDDAREVFQVALRK 179
           DPNNDYSIP++   T + +N+D  DP    SW DLWKPE K  L+L DD REVF +ALRK
Sbjct: 119 DPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTREVFHIALRK 178

Query: 180 LGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSAWVARQA 239
           LGYSGN+TD K+I+ AY EL+KLMPNV  FNSDNPA PY+ GEV LGM+WNGSA  A++ 
Sbjct: 179 LGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKE 238

Query: 240 GTPLEVVWPKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPEIAKQVAETIGYPTPNLA 299
           G P+++V+PKEGGI W+D+ +I + AKNVD A K+I+FLLRPEIA+Q++   GY    L 
Sbjct: 239 GLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGY----LT 294

Query: 300 ARKMLSPEVANDKSLYPDAATIQKGEWQNDVGSASTLYEEYYQKLKAGR 348
             K  + +  +   L+P    + + EWQ+ VG  +  YEEY+ KLKAG+
Sbjct: 295 GVKASNDKFQDVAPLFPSQEDLDRVEWQSAVGDKTVKYEEYFMKLKAGQ 343